Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.181862	Ndst1	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	18		15531
Gene Ontology	[heparan sulfate]-glucosamine N-sulfotransferase activity | cysteine-type endopeptidase activity | Golgi apparatus | integral to membrane | organogenesis | polysaccharide biosynthesis | protein amino acid deacetylation | protein amino acid sulfation | protein amino acid sulfation | proteolysis and peptidolysis | respiratory gaseous exchange | sulfotransferase activity | transferase activity
Human Homolog	NDST1[N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGTGGAGG CAGTGCTGGG CTACCTAGCT GCAGTCAGCA GGGACAACCA TTCCTCCCTC (5) 21.1 0.0211 Cb medulloblastoma GTTTTGGTGT 2.3 0.0023 P8 GC+1d culture AGACTATTTA CTACCTAGCT GGGACAACCA TTCCTCCCTC (5) 26.2 0.0262 P8 GC+SHH+1d culture AAGGTGGAGG AGACTATTTA CTACCTAGCT GCAGTCAGCA GGGACAACCA 23.5 0.0235 3T3 fibroblasts CTACCTAGCT 3.5 0.0035 P1 cortex TTCCTCCCTC (5) 4.5 0.0045 Hypothalamus CAGTGCTGGG CTACCTAGCT GCAGTCAGCA TTCCTCCCTC (5) 9 0.009 E12.5 retina AAGGTGGAGG 3.8 0.0038 E14.5 retina TTCCTCCCTC (5) 1.8 0.0018 E16.5 retina AGACTATTTA CAGTGCTGGG CTACCTAGCT TTCCTCCCTC (5) 10.8 0.0108 E18.5 retina CTACCTAGCT 1.8 0.0018 P0.5 retina CTACCTAGCT GTTTTGGTGT TTCCTCCCTC (5) 11.8 0.0118 P2.5 retina CTACCTAGCT GGGACAACCA TTCCTCCCTC (5) 12.4 0.0124 P4.5 retina CTACCTAGCT GTTTTGGTGT TTCCTCCCTC (5) 8 0.008 P6.5 retina AAGGTGGAGG CAGTGCTGGG CTACCTAGCT TTCCTCCCTC (5) 23.3 0.0233 P10.5 crx+ retina AAGGTGGAGG CTACCTAGCT GCAGTCAGCA GGGACAACCA 9.5 0.0095 Adult retinal CAGTGCTGGG CTACCTAGCT GGGACAACCA TTCCTCCCTC (5) 13.1 0.0131 ONL CTACCTAGCT GCAGTCAGCA 3.8 0.0038