| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAGAGTGTCT (3) GGAAATTAAA (2)
| 6.5 | 0.0065 |
| Cb medulloblastoma | CAGAGTGTCT (3) GGAAATTAAA (2)
| 25.4 | 0.0254 |
| P8 GC+1d culture | ACAATGTCAA (2) GGAAATTAAA (2)
| 4.5 | 0.0045 |
| P8 GC+SHH+1d culture | ACAATGTCAA (2) GGAAATTAAA (2)
| 10.5 | 0.0105 |
| E15 cortex | GCCAAAAAAT (3) GGAAATTAAA (2)
| 14.8 | 0.0148 |
| P1 cortex | ACAATGTCAA (2) CAGAGTGTCT (3) GGAAATTAAA (2)
| 31.8 | 0.0318 |
| Hypothalamus | ACAATGTCAA (2) CAGAGTGTCT (3) GCCAAAAAAT (3) GGAAATTAAA (2) GGGGTGTTAG TGGGAGAAGG
| 23.5 | 0.0235 |
| E14.5 retina | ACAATGTCAA (2) GGAAATTAAA (2) TGGGAGAAGG
| 12.7 | 0.0127 |
| E16.5 retina | ACAATGTCAA (2) GGAAATTAAA (2)
| 28.9 | 0.0289 |
| E18.5 retina | ACAATGTCAA (2) GGAAATTAAA (2)
| 3.6 | 0.0036 |
| P0.5 retina | GCCAAAAAAT (3) GGAAATTAAA (2) TGGGAGAAGG
| 13.8 | 0.0138 |
| P2.5 retina | GGAAATTAAA (2)
| 5.3 | 0.0053 |
| P4.5 retina | CAGAGTGTCT (3) GGAAATTAAA (2)
| 17.9 | 0.0179 |
| P6.5 retina | CAGAGTGTCT (3) GGAAATTAAA (2) GGGGTGTTAG
| 8.4 | 0.0084 |
| P10.5 crx- retina | ACAATGTCAA (2) GGAAATTAAA (2)
| 5.6 | 0.0056 |
| P10.5 crx+ retina | CAGAGTGTCT (3) GGAAATTAAA (2) GGGGTGTTAG
| 17.3 | 0.0173 |