Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.18230	1300007B12Rik	RIKEN cDNA 1300007B12 gene	1		57439
Gene Ontology	integral to membrane
Human Homolog	C1orf37[chromosome 1 open reading frame 37]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGCAGGGGA TAAAATTTGC TAATTTGCAT 11.4 0.0114 Cb medulloblastoma CAATTAAAAA GAGAAGCTGG (3) GAGCAGGGGA 23.1 0.0231 P8 GC+1d culture CAGAGCCAGG (2) GAAGAACGTT GAGCAGGGGA GGGTGGGGAA (2) TTGAAAGCAA (2) 18.2 0.0182 P8 GC+SHH+1d culture GAAGAACGTT GAGCAGGGGA TAAAATTTGC TTATCAGGGG TTGAAAGCAA (2) 18.8 0.0188 3T3 fibroblasts GAGCAGGGGA TAATTTGCAT 21 0.021 E15 cortex CAGAGCCAGG (2) GAAGAACGTT GAGCAGGGGA TTGAAAGCAA (2) 24.6 0.0246 P1 cortex CAATTAAAAA 4.5 0.0045 Hypothalamus GAGAAGCTGG (3) GAGCAGGGGA 7.2 0.0072 E12.5 retina GAAGAACGTT GAGCAGGGGA GGGTGGGGAA (2) TTATCAGGGG TTGAAAGCAA (2) 18.8 0.0188 E14.5 retina GAGCAGGGGA TTATCAGGGG TTGAAAGCAG (2) 18.2 0.0182 E16.5 retina GAGCAGGGGA GCATCTTTTG (2) GGGTGGGGAA (2) 19.9 0.0199 E18.5 retina CAATTAAAAA GAAGAACGTT GAGCAGGGGA 10.9 0.0109 P0.5 retina GAAGAACGTT GAGCAGGGGA 9.9 0.0099 P2.5 retina GAAGAACGTT GAGAAGCTGG (3) GAGCAGGGGA TTATCAGGGG TTGAAAGCAA (2) 21.2 0.0212 P4.5 retina GAGCAGGGGA TAAAATTTGC TTGAAAGCAA (2) 9.9 0.0099 P6.5 retina CAATTAAAAA GAGCAGGGGA GGGTGGGGAA (2) TTGAAAGCAA (2) TTGAAAGCAG (2) 21.8 0.0218 P10.5 crx- retina GAAGAACGTT GAGCAGGGGA GGGTGGGGAA (2) TAAAATTTGC 13.1 0.0131 P10.5 crx+ retina GAAGAACGTT GAGCAGGGGA GGGTGGGGAA (2) TTGAAAGCAA (2) 40.3 0.0403 Adult retinal CAGAGCCAGG (2) GAAGAACGTT GAGCAGGGGA TTGAAAGCAA (2) 7.6 0.0076 ONL CAGAGCCAGG (2) GAGAAGCTGG (3) GGGTGGGGAA (2) TTGAAAGCAA (2) TTGAAAGCAG (2) 11.4 0.0114