| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATAATATATA (2) TGCCAGAGTA (2) TGTATAAAAA (3)
| 37.5 | 0.0375 |
| Cb medulloblastoma | ATAATATATA (2) ATGAAAAGAC TGCCAGAGTA (2) TGTATAAAAA (3)
| 60.1 | 0.0601 |
| P8 GC+1d culture | TGCCAGAGTA (2) TGTATAAAAA (3)
| 56 | 0.056 |
| P8 GC+SHH+1d culture | ATGAAAAGAC TGCCAGAGTA (2) TGTATAAAAA (3)
| 79.7 | 0.0797 |
| 3T3 fibroblasts | TGCCAGAGTA (2)
| 17.5 | 0.0175 |
| E15 cortex | TGCCAGAGTA (2) TGTATAAAAA (3)
| 14.8 | 0.0148 |
| P1 cortex | TGCCAGAGTA (2) TGTATAAAAA (3)
| 163.6 | 0.1636 |
| Hypothalamus | ATAATATATA (2) ATGAAAAGAC TGCCAGAGTA (2) TGTATAAAAA (3)
| 85.1 | 0.0851 |
| E12.5 retina | ATGAAAAGAC TGCCAGAGTA (2) TGTATAAAAA (3)
| 43.2 | 0.0432 |
| E14.5 retina | ATGAAAAGAC TGCCAGAGTA (2) TGTATAAAAA (3)
| 71 | 0.071 |
| E16.5 retina | TGCCAGAGTA (2) TGTATAAAAA (3)
| 63.3 | 0.0633 |
| E18.5 retina | ATGAAAAGAC TGCCAGAGTA (2) TGTATAAAAA (3)
| 127.4 | 0.1274 |
| P0.5 retina | TGCCAGAGTA (2) TGTATAAAAA (3)
| 29.4 | 0.0294 |
| P2.5 retina | TGCCAGAGTA (2) TGTATAAAAA (3)
| 44 | 0.044 |
| P4.5 retina | ATAATATATA (2) ATGAAAAGAC TGCCAGAGTA (2) TGTATAAAAA (3)
| 81.2 | 0.0812 |
| P6.5 retina | ATGAAAAGAC TGCCAGAGTA (2) TGTATAAAAA (3)
| 80.1 | 0.0801 |
| P10.5 crx- retina | TGCCAGAGTA (2) TGTATAAAAA (3)
| 44.6 | 0.0446 |
| P10.5 crx+ retina | TGCCAGAGTA (2) TGTATAAAAA (3)
| 55.7 | 0.0557 |
| Adult retinal | TGCCAGAGTA (2) TGTATAAAAA (3)
| 26 | 0.026 |
| ONL | ATGAAAAGAC TGCCAGAGTA (2) TGTATAAAAA (3)
| 34.4 | 0.0344 |