| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CGGCTTTTAG (2) GGCTGGACCC GTGCCAAGGA TCATACGCTC TGAATATCCA
| 11.4 | 0.0114 |
| Cb medulloblastoma | GTGCCAAGGA TCATACGCTC TGAATATCCA
| 23 | 0.023 |
| P8 GC+1d culture | CGCAAGGCTG CGGCTTTTAG (2) GTGCCAAGGA TCATACGCTC TGAATATCCA
| 22.8 | 0.0228 |
| P8 GC+SHH+1d culture | CGCAAGGCTG CGGCTTTTAG (2) GGCTGGACCC GTGCCAAGGA TCATACGCTC TGAATATCCA
| 25.7 | 0.0257 |
| 3T3 fibroblasts | GGCTGGACCC TCATACGCTC
| 14 | 0.014 |
| E15 cortex | CGGCTTTTAG (2) GTGCCAAGGA TCATACGCTC
| 14.7 | 0.0147 |
| P1 cortex | GGCTGGACCC GTGCCAAGGA TCATACGCTC
| 22.7 | 0.0227 |
| Hypothalamus | GTGCCAAGGA TCATACGCTC TGAATATCCA
| 14.4 | 0.0144 |
| E12.5 retina | GGCTGGACCC GTGCCAAGGA TCATACGCTC TGAATATCCA
| 11.4 | 0.0114 |
| E14.5 retina | GTGCCAAGGA
| 5.5 | 0.0055 |
| E16.5 retina | GTGCCAAGGA TGAATATCCA
| 3.6 | 0.0036 |
| E18.5 retina | GTGCCAAGGA TCATACGCTC
| 10.9 | 0.0109 |
| P0.5 retina | CGGCTTTTAG (2) TCATACGCTC TGAATATCCA
| 6 | 0.006 |
| P2.5 retina | CGGCTTTTAG (2) GTGCCAAGGA TCATACGCTC TGAATATCCA
| 28.2 | 0.0282 |
| P4.5 retina | GGCTGGACCC GTGCCAAGGA TGAATATCCA
| 13.9 | 0.0139 |
| P6.5 retina | CGCAAGGCTG CGGCTTTTAG (2) GGCTGGACCC GTGCCAAGGA TCATACGCTC TGAATATCCA
| 21.7 | 0.0217 |
| P10.5 crx- retina | CGGCTTTTAG (2) GTGCCAAGGA TCATACGCTC TGAATATCCA
| 29.8 | 0.0298 |
| P10.5 crx+ retina | GGCTGGACCC GTGCCAAGGA TCATACGCTC TGAATATCCA
| 26.9 | 0.0269 |
| Adult retinal | CGGCTTTTAG (2) GGCTGGACCC GTGCCAAGGA TCATACGCTC TGAATATCCA
| 20.5 | 0.0205 |
| ONL | CGCAAGGCTG GTGCCAAGGA
| 9.6 | 0.0096 |