| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CTGGCCTGTG GAAGATGGAG (4) GACAGCACAC GCTGCCCTTC GGACAGCACA TACAGTCTAC (3)
| 14.7 | 0.0147 |
| Cb medulloblastoma | GCTGCCCTTC GTGTAGATGC (2) TACAGTCTAC (3)
| 9.2 | 0.0092 |
| P8 GC+1d culture | GAAGATGGAG (4) GACAGCACAC GCTGCCCTTC GGACAGCACA
| 17.2 | 0.0172 |
| P8 GC+SHH+1d culture | GAAGATGGAG (4) GACAGCACAC TACAGTCTAC (3)
| 16.4 | 0.0164 |
| 3T3 fibroblasts | CTGGCCTGTG GAAGATGGAG (4) GACAGCACAC GCTGCCCTTC GGACAGCACA GTGTAGATGC (2)
| 63 | 0.063 |
| E15 cortex | GAAGATGGAG (4) GGACAGCACA GGCAGCACAC
| 24.7 | 0.0247 |
| P1 cortex | GAAGATGGAG (4) GCTGCCCTTC GGCAGCACAC GTGTAGATGC (2)
| 31.7 | 0.0317 |
| Hypothalamus | GAAGATGGAG (4) GCTGCCCTTC TACAGTCTAC (3)
| 18.1 | 0.0181 |
| E12.5 retina | GAAGATGGAG (4) GCTGCCCTTC TACAGTCTAC (3)
| 26.3 | 0.0263 |
| E14.5 retina | GAAGATGGAG (4) GCTGCCCTTC
| 7.3 | 0.0073 |
| E16.5 retina | GAAGATGGAG (4) GACAGCACAC GGACAGCACA GTGTAGATGC (2)
| 7.2 | 0.0072 |
| E18.5 retina | GAAGATGGAG (4)
| 5.5 | 0.0055 |
| P0.5 retina | GAAGATGGAG (4) GACAGCACAC GCTGCCCTTC
| 35.4 | 0.0354 |
| P2.5 retina | GAAGATGGAG (4) GACAGCACAC GCTGCCCTTC TACAGTCTAC (3)
| 30 | 0.03 |
| P4.5 retina | GAAGATGGAG (4) GCTGCCCTTC
| 8 | 0.008 |
| P6.5 retina | GAAGATGGAG (4) GCTGCCCTTC GTGTAGATGC (2) TACAGTCTAC (3)
| 18.3 | 0.0183 |
| P10.5 crx- retina | TACAGTCTAC (3)
| 1.9 | 0.0019 |
| P10.5 crx+ retina | GAAGATGGAG (4) GCTGCCCTTC TACAGTCTAC (3)
| 7.6 | 0.0076 |
| Adult retinal | GAAGATGGAG (4) GCTGCCCTTC GTGTAGATGC (2)
| 24.1 | 0.0241 |
| ONL | GAAGATGGAG (4) GCTGCCCTTC
| 11.4 | 0.0114 |