Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1853	4933429D13Rik	RIKEN cDNA 4933429D13 gene	10		71257
Mm.1853	Galgt1	UDP-N-acetyl-alpha-D-galactosamine:(N-acetylneuraminyl)-galactosylglucosylceramide-beta-1, 4-N-acetylgalactosaminyltransferase	10	10 69.25 cM	14421
Gene Ontology	(N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase activity | extracellular space | Golgi apparatus | integral to Golgi membrane | integral to membrane | lipid glycosylation | transferase activity | transferase activity, transferring glycosyl groups | transferase activity, transferring hexosyl groups
Human Homolog	GALGT[UDP-N-acetyl-alpha-D-galactosamine:(N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase (GalNAc-T)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 35 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACCCCACCC (3) GTGACACCTG (3) 4.9 0.0049 Cb medulloblastoma AAGATTAAAT (3) CACCCCACCC (3) GGAAGCTTGC GTGACACCTG (3) 11.5 0.0115 P8 GC+1d culture AAGATTAAAT (3) GTGACACCTG (3) 4.5 0.0045 3T3 fibroblasts GTGACACCTG (3) 3.5 0.0035 E15 cortex CACCCCACCC (3) GTGACACCTG (3) 19.8 0.0198 P1 cortex GTGACACCTG (3) 9.1 0.0091 Hypothalamus CACCCCACCC (3) GCACCAAAAA (2) GGAAGCTTGC GTGACACCTG (3) 14.4 0.0144 E14.5 retina CACCCCACCC (3) 5.5 0.0055 E16.5 retina CACCCCACCC (3) GTGACACCTG (3) 7.2 0.0072 E18.5 retina CACCCCACCC (3) GTGACACCTG (3) 5.4 0.0054 P0.5 retina CACCCCACCC (3) 2 0.002 P2.5 retina CACCCCACCC (3) 3.5 0.0035 P4.5 retina CACCCCACCC (3) GTGACACCTG (3) 6 0.006 P6.5 retina GGAAGCTTGC GTGACACCTG (3) 8.4 0.0084 P10.5 crx- retina CACCCCACCC (3) GTGACACCTG (3) 7.4 0.0074 P10.5 crx+ retina CACCCCACCC (3) GCACCAAAAA (2) GTGACACCTG (3) 11.5 0.0115 Adult retinal GCACCAAAAA (2) GTGACACCTG (3) 5.6 0.0056 ONL GTGACACCTG (3) 5.7 0.0057