Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1886	Thoc4	THO complex 4	11		21681
Gene Ontology	mRNA processing | mRNA-nucleus export | nuclear mRNA splicing, via spliceosome | nucleic acid binding | nucleus | protein folding | RNA binding | single-stranded DNA binding | spliceosome complex | transport
Human Homolog	THOC4[THO complex 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTTTTTAGA CCAATTTACA CCTAAAAAAA (2) GTGCTAATCA (2) TAAAGTTTTT (2) 13.1 0.0131 Cb medulloblastoma CCTAAAAAAA (2) TAAAGTTTTT (2) 9.2 0.0092 P8 GC+1d culture CCAATTTACA CCTAAAAAAA (2) GTGCTAATCA (2) TAAAGTTTTT (2) 6.7 0.0067 P8 GC+SHH+1d culture AGTTTTTAGA CCAATTTACA GTGCTAATCA (2) TAAAGTTTTT (2) 18.8 0.0188 E15 cortex CCAATTTACA GTGCTAATCA (2) TAAAGTTTTT (2) 19.7 0.0197 P1 cortex CCAATTTACA 9.1 0.0091 Hypothalamus CCAATTTACA GTGCTAATCA (2) 7.2 0.0072 E12.5 retina AGTTTTTAGA CCAATTTACA GTGCTAATCA (2) 7.6 0.0076 E14.5 retina CCAATTTACA GTGCTAATCA (2) TAAAGTTTTT (2) 23.8 0.0238 E16.5 retina CCAATTTACA CCTAAAAAAA (2) TAAAGTTTTT (2) 14.4 0.0144 E18.5 retina CCAATTTACA CCTAAAAAAA (2) GTGCTAATCA (2) TAAAGTTTTT (2) 16.3 0.0163 P0.5 retina CCAATTTACA CCTAAAAAAA (2) GTGCTAATCA (2) TAAAGTTTTT (2) 17.8 0.0178 P2.5 retina AGTTTTTAGA CCAATTTACA GTGCTAATCA (2) TAAAGTTTTT (2) 10.6 0.0106 P4.5 retina CCAATTTACA CCTAAAAAAA (2) GTGCTAATCA (2) 8 0.008 P6.5 retina CCAATTTACA CCTAAAAAAA (2) GTGCTAATCA (2) 6.7 0.0067 P10.5 crx- retina CCTAAAAAAA (2) TAAAGTTTTT (2) 5.6 0.0056 P10.5 crx+ retina AGTTTTTAGA CCAATTTACA CCTAAAAAAA (2) GTGCTAATCA (2) 11.4 0.0114 Adult retinal CCTAAAAAAA (2) TAAAGTTTTT (2) 5.6 0.0056 ONL GTGCTAATCA (2) 1.9 0.0019