| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CTGTGTTTAC GATGAAGAGC (4) GCAGCTGGCC GCAGCTGTCC GCCCCAGACT (3)
| 8 | 0.008 |
| Cb medulloblastoma | CGCATACATA GCCCCAGACT (3) TTTTAAACTG (6)
| 9.2 | 0.0092 |
| P8 GC+1d culture | CGCATACATA GCAGCTGGCC TTTTAAACTG (6)
| 10.3 | 0.0103 |
| P8 GC+SHH+1d culture | CGCATACATA GCCCCAGACT (3) TTTTAAACTG (6)
| 11.7 | 0.0117 |
| E15 cortex | GCAGCTGTCC GCCCCAGACT (3)
| 14.8 | 0.0148 |
| Hypothalamus | CCAAGTGTTC (2) GCCCCAGACT (3) TTTTAAACTG (6)
| 5.4 | 0.0054 |
| E12.5 retina | CCAAGTGTTC (2) CGCATACATA
| 3.8 | 0.0038 |
| E14.5 retina | CGCATACATA GCAGCTGGCC
| 5.4 | 0.0054 |
| E16.5 retina | CGCATACATA GCAGCTGGCC GCCCCAGACT (3) TTTTAAACTG (6)
| 14.4 | 0.0144 |
| E18.5 retina | CTGTGTTTAC GCAGCTGTCC
| 3.6 | 0.0036 |
| P0.5 retina | GCAGCTGGCC GCCCCAGACT (3)
| 5.9 | 0.0059 |
| P2.5 retina | CCAAGTGTTC (2) CGCATACATA
| 5.3 | 0.0053 |
| P4.5 retina | CGCATACATA CTGTGTTTAC
| 6 | 0.006 |
| P6.5 retina | CCAAGTGTTC (2) CGCATACATA CTGTGTTTAC GATGAAGAGC (4) TTTTAAACTG (6)
| 18.4 | 0.0184 |
| P10.5 crx- retina | CCAAGTGTTC (2) CGCATACATA GCCCCAGACT (3)
| 13 | 0.013 |
| P10.5 crx+ retina | CCAAGTGTCC CGCATACATA CTGTGTTTAC TTTTAAACTG (6)
| 21.1 | 0.0211 |
| Adult retinal | CCAAGTGTCC CGCATACATA CTGTGTTTAC GATGAAGAGC (4) GCCCCAGACT (3)
| 26.1 | 0.0261 |
| ONL | CCAAGTGTCC CGCATACATA GATGAAGAGC (4) TTTTAAACTG (6)
| 24.8 | 0.0248 |