| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AACCTTTCTT (3) CAGACTGCTC (3) CTAAAAGCAG (3) CTAGAAGCAG (3) GCTCGTACAA
| 11.3 | 0.0113 |
| Cb medulloblastoma | CAGACTGCTC (3) GAAAATGCAT
| 20.8 | 0.0208 |
| P8 GC+1d culture | ACCTTAGGCA (3) CAGACTGCTC (3) CTAAAAGCAG (3) CTAGAAGCAG (3) GCTCGTACAA
| 14.7 | 0.0147 |
| P8 GC+SHH+1d culture | AACCTTTCTT (3) ACCTTAGGCA (3) CAGACTGCTC (3) CTAGAAGCAG (3) GAAAATGCAT
| 16.5 | 0.0165 |
| 3T3 fibroblasts | CAGACTGCTC (3)
| 14 | 0.014 |
| E15 cortex | ACCTTAGGCA (3) CAGACTGCTC (3)
| 9.8 | 0.0098 |
| P1 cortex | AACCTTTCTT (3) ACCTTAGGCA (3) CAGACTGCTC (3) CTAGAAGCAG (3)
| 40.8 | 0.0408 |
| Hypothalamus | GAAAATGCAT
| 7.2 | 0.0072 |
| E12.5 retina | CTAGAAGCAG (3)
| 1.9 | 0.0019 |
| E14.5 retina | CTAGAAGCAG (3)
| 1.8 | 0.0018 |
| E16.5 retina | AACCTTTCTT (3) CAGACTGCTC (3) GAAAATGCAT GCTCGTACAA
| 18.1 | 0.0181 |
| E18.5 retina | TTTTTAATGC (3)
| 3.6 | 0.0036 |
| P0.5 retina | ACCTTAGGCA (3) CTAGAAGCAG (3)
| 4 | 0.004 |
| P2.5 retina | CAGACTGCTC (3) CTAGAAGCAG (3) GAAAATGCAT
| 17.5 | 0.0175 |
| P4.5 retina | ACCTTAGGCA (3) CAGACTGCTC (3) CTAGAAGCAG (3) GCTCGTACAA TTTTTAATGC (3)
| 19.9 | 0.0199 |
| P6.5 retina | CAGACTGCTC (3) CTAGAAGCAG (3) GAAAATGCAT
| 6.7 | 0.0067 |
| P10.5 crx- retina | CAGACTGCTC (3) GAAAATGCAT GCTCGTACAA TTTTTAATGC (3)
| 27.9 | 0.0279 |
| P10.5 crx+ retina | GAAAATGCAT GCTCGTACAA
| 7.7 | 0.0077 |
| Adult retinal | CAGACTGCTC (3) CTAGAAGCAG (3) GAAAATGCAT
| 13 | 0.013 |
| ONL | CAGACTGCTC (3) CTAAAAGCAG (3) GAAAATGCAT TTTTTAATGC (3)
| 9.5 | 0.0095 |