Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.19169	Txnl1	thioredoxin-like 1	18		53382
Mm.19169	AA407787	expressed sequence AA407787	18		106842
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGTTGTAAA (2) TGTATGTGAG (3) 11.4 0.0114 Cb medulloblastoma AAAAGTTGTA (2) CAGTTGTAAA (2) TATCACGATT (2) 20.8 0.0208 P8 GC+1d culture AAAAGTTGTA (2) AAGTTTCAAG (2) CAGTTGTAAA (2) 19.3 0.0193 P8 GC+SHH+1d culture AAGTTTCAAG (2) CAGTTGTAAA (2) TGTATGTGAG (3) TTCTTTCTTG 18.8 0.0188 3T3 fibroblasts CAGTTGTAAA (2) 3.5 0.0035 E15 cortex CAGTTGTAAA (2) 4.9 0.0049 P1 cortex AAAAGTTGTA (2) CAGTTGTAAA (2) TATCACGATT (2) 13.5 0.0135 Hypothalamus AAAAGTTGTA (2) CAGTTGTAAA (2) GCAGTTCCCA TGGGTGATGG TGTATGTGAG (3) 30.7 0.0307 E12.5 retina AAAAGTTGTA (2) AAGTTTCAAG (2) CAGTTGTAAA (2) TGTATGTGAG (3) 26.4 0.0264 E14.5 retina AAAAGTTGTA (2) CAGTTGTAAA (2) 25.5 0.0255 E16.5 retina AAAAGTTGTA (2) AAGTTTCAAG (2) CAGTTGTAAA (2) TATCACGATT (2) TGTATGTGAG (3) 32.5 0.0325 E18.5 retina AAAAGTTGTA (2) CAGTTGTAAA (2) TATCACGATT (2) TGGGTGATGG 45.4 0.0454 P0.5 retina CAGTTGTAAA (2) TGTATGTGAG (3) 15.7 0.0157 P2.5 retina AAAAGTTGTA (2) CAGTTGTAAA (2) TATCACGATT (2) TGGGTGATGG 33.6 0.0336 P4.5 retina AAGTTTCAAG (2) CAGTTGTAAA (2) TATCACGATT (2) TGGGTGATGG 23.8 0.0238 P6.5 retina AAAAGTTGTA (2) CAGTTGTAAA (2) TGTATGTGAG (3) 30.1 0.0301 P10.5 crx- retina AAGTTTCAAG (2) TGGGTGATGG TTCTTTCTTG 7.5 0.0075 P10.5 crx+ retina CAGTTGTAAA (2) GCAGTTCCCA TTCTTTCTTG 5.7 0.0057 Adult retinal AAAAGTTGTA (2) CAGTTGTAAA (2) GCAGTTCCCA TGGGTGATGG 9.4 0.0094 ONL AAAAGTTGTA (2) CAGTTGTAAA (2) 11.4 0.0114