Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.192580	Rtn4	reticulon 4	11		68585
Gene Ontology	angiogenesis | cell body | cell projection | endoplasmic reticulum | integral to membrane | neurogenesis | protein binding | regulation of cell migration
Human Homolog	RTN4[reticulon 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGAAAAGG GGAAGGAAGG GGAAGGATAG GTGGAGGTGA (3) 8.1 0.0081 Cb medulloblastoma AGACTGTATT GCCAAAATCC GGAAGGATAG TGAACAGCAC 23.1 0.0231 P8 GC+1d culture AGACTGTATT GAAGACATAG GCCAAAATCC 9.1 0.0091 P8 GC+SHH+1d culture AGACTGTATT GCATCCTTAA GCCAAAATCC GGAAGGAAGG TGATTTAATT 11.7 0.0117 3T3 fibroblasts GCATCCTTAA GCCAAAATCC GGAAGGAAGG GTGGAGGTGA (3) 38.5 0.0385 E15 cortex GGAAGGAAGG GGAAGGATAG 19.8 0.0198 P1 cortex GCCAAAATCC GGAAGGATAG 22.7 0.0227 Hypothalamus AGACTGTATT GCCAAAATCC TGAACAGCAC 9 0.009 E12.5 retina AATGAAAAGG GGAAGGAAGG GTGGAGGTGA (3) 9.4 0.0094 E14.5 retina AATTTATTTT (6) GAAGACATAG GCCAAAATCC 5.4 0.0054 E16.5 retina GCATCCTTAA GCCAAAATCC GTGGAGGTGA (3) 5.4 0.0054 E18.5 retina AATTTATTTT (6) AGACTGTATT GCCAAAATCC 7.2 0.0072 P0.5 retina GCCAAAATCC TGAACAGCAC 7.9 0.0079 P2.5 retina AATGAAAAGG GCCAAAATCC GTGGAGGTGA (3) TGAACAGCAC 10.6 0.0106 P4.5 retina AGACTGTATT GCCAAAATCC GGAAGGAAGG 11.9 0.0119 P6.5 retina AATGAAAAGG GAAGACATAG GCCAAAATCC TGATTTAATT 16.7 0.0167 P10.5 crx- retina AATTTATTTT (6) AGACTGTATT GCATCCTTAA GCCAAAATCC TGAACAGCAC 13.1 0.0131 P10.5 crx+ retina GAAGACATAG GCCAAAATCC 3.8 0.0038 Adult retinal AGACTGTATT GCATCCTTAA GCCAAAATCC 24.2 0.0242 ONL AGACTGTATT GCATCCTTAA GCCAAAATCC 13.4 0.0134