| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGATCAAGA (2) CCTGAACACA (3) GGGTTGCCAG (2) GTGTTAATTT
| 65.3 | 0.0653 |
| Cb medulloblastoma | AAGATCAAGA (2) CCATCAGCCA CCTGAACACA (3) CCTTCCAAAA
| 25.4 | 0.0254 |
| P8 GC+1d culture | AAGATCAAGA (2) ACAAATACAT CCATCAGCCA GGGTTGCCAG (2) GTGTTAATTT
| 30.8 | 0.0308 |
| P8 GC+SHH+1d culture | AAGATCAAGA (2) ACAAATACAT CCTGAACACA (3) GGGTTGCCAG (2)
| 23.4 | 0.0234 |
| 3T3 fibroblasts | AAGATCAAGA (2) CCATCAGCCA
| 63.1 | 0.0631 |
| E15 cortex | AAGATCAAGA (2) GGAAAGCCAC GGGTTGCCAG (2) GTGTTAATTT
| 113.7 | 0.1137 |
| P1 cortex | AAGATCAAGA (2)
| 63.6 | 0.0636 |
| Hypothalamus | AAGATCAAGA (2) CCTGAACACA (3)
| 14.5 | 0.0145 |
| E12.5 retina | AAGATCAAGA (2) CCATCAGCCA GGAAAGCCAC
| 54.5 | 0.0545 |
| E14.5 retina | AAGATCAAGA (2) CCATCAGCCA GGGTTGCCAG (2)
| 10.9 | 0.0109 |
| E16.5 retina | AAGATCAAGA (2) CCATCAGCCA CCTGAACACA (3)
| 10.8 | 0.0108 |
| E18.5 retina | AAGATCAAGA (2) CCTGAACACA (3) GGAAAGCCAC GGGTTGCCAG (2)
| 18.2 | 0.0182 |
| P0.5 retina | AAGATCAAGA (2) CCTGAACACA (3) GGAAAGCCAC
| 31.5 | 0.0315 |
| P2.5 retina | AAGATCAAGA (2) CCATCAGCCA CCTTCCAAAA GGGTTGCCAG (2)
| 12.4 | 0.0124 |
| P4.5 retina | AAGATCAAGA (2) CCTGAACACA (3) CCTTCCAAAA
| 15.9 | 0.0159 |
| P6.5 retina | AAGATCAAGA (2) CCATCAGCCA CCTGAACACA (3) GGGTTGCCAG (2)
| 13.4 | 0.0134 |
| P10.5 crx- retina | AAGATCAAGA (2) GGAAAGCCAC
| 3.8 | 0.0038 |
| P10.5 crx+ retina | AAGATCAAGA (2) CCTGAACACA (3)
| 19.2 | 0.0192 |
| Adult retinal | AAGATCAAGA (2) CCATCAGCCA CCTGAACACA (3) GGGTTGCCAG (2)
| 13.1 | 0.0131 |
| ONL | AAGATCAAGA (2) CCTGAACACA (3)
| 7.6 | 0.0076 |