| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGCTGCTGGA (2) CTGGCTAGAA GTATACAGAC
| 11.4 | 0.0114 |
| Cb medulloblastoma | GAGGGTAGGA (3)
| 2.3 | 0.0023 |
| P8 GC+1d culture | CTGGCTAGAA GTATACAGAC
| 5.7 | 0.0057 |
| P8 GC+SHH+1d culture | CTGGCTAGAA GAAAATCAAA GAGGGTAGGA (3) GCCAGGAAGC (3)
| 5.9 | 0.0059 |
| 3T3 fibroblasts | ATGATGAAGG (2) GTATACAGAC
| 7 | 0.007 |
| E15 cortex | GCCAGGAAGC (3)
| 9.9 | 0.0099 |
| Hypothalamus | GGGGCCTGAG (2) GTATACAGAC
| 3.6 | 0.0036 |
| E12.5 retina | CTGGCTAGAA GTATACAGAC
| 7.6 | 0.0076 |
| E14.5 retina | ATGATGAAGG (2) CTGGCTAGAA GAAAATCAAA GCCAGGAAGC (3) GGGGCCTGAG (2)
| 12.6 | 0.0126 |
| E16.5 retina | GTATACAGAC TGCACGCCTG
| 7.2 | 0.0072 |
| E18.5 retina | CTGGCTAGAA GAAAATCAAA
| 5.4 | 0.0054 |
| P0.5 retina | CTGGCTAGAA GAAAATCAAA GGGGCCTGAG (2)
| 6 | 0.006 |
| P2.5 retina | AGCTGCTGGA (2) CTGGCTAGAA GAAAATCAAA GTATACAGAC TGCACGCCTG
| 10.7 | 0.0107 |
| P4.5 retina | CTGGCTAGAA GAAAATCAAA GGGGCCTGAG (2) GTATACAGAC TGCACGCCTG
| 19.9 | 0.0199 |
| P6.5 retina | GAAAATCAAA GTATACAGAC
| 23.4 | 0.0234 |
| P10.5 crx- retina | GAAAATCAAA GAGGGTAGGA (3) GGGGCCTGAG (2) GTATACAGAC
| 14.9 | 0.0149 |
| P10.5 crx+ retina | CTGGCTAGAA GAAAATCAAA GTATACAGAC
| 42.2 | 0.0422 |
| Adult retinal | CTGGCTAGAA GAAAATCAAA GTATACAGAC
| 74.2 | 0.0742 |
| ONL | AGCTGCTGGA (2) ATGATGAAGG (2) GAAAATCAAA GAGGGTAGGA (3)
| 99.6 | 0.0996 |