| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CACATACCCA (4) GTTTTCATTT (3)
| 14.7 | 0.0147 |
| Cb medulloblastoma | GTTTTCATTT (3)
| 2.3 | 0.0023 |
| P8 GC+1d culture | GAAGCTGTGG GTTTTCATTT (3)
| 5.7 | 0.0057 |
| P8 GC+SHH+1d culture | CACATACCCA (4) GTTTTCATTT (3)
| 14.1 | 0.0141 |
| 3T3 fibroblasts | GAAGCTGTGG GTTTTCATTT (3)
| 7 | 0.007 |
| Hypothalamus | GAAGCTGTGG
| 3.6 | 0.0036 |
| E12.5 retina | CACATACCCA (4) GAAGCTGTGG GTTTTCATTT (3)
| 7.6 | 0.0076 |
| E14.5 retina | GTTTTCATTT (3)
| 7.3 | 0.0073 |
| E16.5 retina | CACATACCCA (4) GAAGCTGTGG GTTTTCATTT (3)
| 10.8 | 0.0108 |
| E18.5 retina | GTTTTCATTT (3)
| 3.6 | 0.0036 |
| P0.5 retina | CACATACCCA (4) GAAGCTGTGG GTTTTCATTT (3)
| 15.8 | 0.0158 |
| P2.5 retina | GTTTTCATTT (3)
| 15.8 | 0.0158 |
| P4.5 retina | GAAGCTGTGG GTTTTCATTT (3)
| 11.9 | 0.0119 |
| P6.5 retina | CACATACCCA (4) GTTTTCATTT (3)
| 13.4 | 0.0134 |
| P10.5 crx- retina | CACATACCCA (4) GAAGCTGTGG GTTTTCATTT (3)
| 39.1 | 0.0391 |
| P10.5 crx+ retina | GTTTTCATTT (3)
| 5.8 | 0.0058 |
| Adult retinal | GTTTTCATTT (3)
| 11.1 | 0.0111 |
| ONL | CACATACCCA (4) GAAGCTGTGG GTTTTCATTT (3)
| 9.5 | 0.0095 |