Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.195310	Hnrpdl	heterogeneous nuclear ribonucleoprotein D-like	5	5 54.0 cM	50926
Gene Ontology	DNA binding | mRNA metabolism | nucleic acid binding | nucleus | ribonucleoprotein complex | RNA binding | viral nucleocapsid
Human Homolog	HNRPDL[heterogeneous nuclear ribonucleoprotein D-like]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 147 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTGGCCTC GTGGGTCAGT (3) GTGTATCTTT (2) TACACTACAA TTAAACCTCA 86.5 0.0865 Cb medulloblastoma ACACGTCTAT CCTTGGCTTC GGATACAAAA GTGTATCTTT (2) TTAAACCTCA 39.3 0.0393 P8 GC+1d culture AAAGTGGACC (2) ACACAATTGT CCTTGGCCTC CCTTGGCTTC CTGAGAGCCA (3) GGATACAAAA GTGGGTCAGT (3) GTGTATCTTT (2) TACACTACAA TACCAGCGTA TTAAACCTCA 67 0.067 P8 GC+SHH+1d culture CCTTGGCCTC CCTTGGCTTC CTGAGAGCCA (3) GGGTATCTTT GTAACTTGAC GTGGGTCAGT (3) GTGTATCTTT (2) TACCAGCGTA TTAAACCCCA TTAAACCTCA 76.3 0.0763 3T3 fibroblasts CCTTGGCCTC CTGAGAGCCA (3) GTGGGTCAGT (3) GTGTATCTTT (2) TTAAACCTCA 31.5 0.0315 E15 cortex CCTTGGCCTC CTGAGAGCCA (3) GTGTATCTTT (2) 19.7 0.0197 P1 cortex CTGAGAGCCA (3) GTGTATCTTT (2) TACCAGCGTA TTAAACCTCA 45.3 0.0453 Hypothalamus ACACGTCTAT GGATACAAAA GGGGGGGGGA (2) GTGGGTCAGT (3) GTGTATCTTT (2) TACACTACAA TTAAACCTCA 48.8 0.0488 E12.5 retina AAAGTGGACC (2) CCTTGGCCTC CCTTGGCTTC GGATACAAAA GGGGGGGGGA (2) GGGTATCTTT GTAACTTGAC GTGTATCTTT (2) TACCAGCGTA TTAAACCTCA TTTAGAGTAC 157.9 0.1579 E14.5 retina AAAGTGGACC (2) CCTTGGCCTC GTGTATCTTT (2) TGACTTTCCA TTAAACCTCA 122 0.122 E16.5 retina ACACAATTGT CCTTGGCCTC CTGAGAGCCA (3) GTAACTTGAC GTGTATCTTT (2) TACCAGCGTA TTAAACCTCA TTTAGAGTAC 99.6 0.0996 E18.5 retina CCTTGGCCTC GGATACAAAA GGGGGGGGGA (2) GTGGGTCAGT (3) GTGTATCTTT (2) TGACTTTCCA TTAAACCTCA 129 0.129 P0.5 retina CCTTGGCCTC CCTTGGCTTC CTGAGAGCCA (3) GTAACTTGAC GTGTATCTTT (2) TACACTACAA TTAAACCCCA TTAAACCTCA TTCATCAGCA (8) TTTAGAGTAC 139.6 0.1396 P2.5 retina ACACGTCTAT CCTTGGCCTC CCTTGGCTTC CTGAGAGCCA (3) GGATACAAAA GTGTATCTTT (2) TACACTACAA TACCAGCGTA TTAAACCCCA TTAAACCTCA 181.5 0.1815 P4.5 retina CCTTGGCTTC GGATACAAAA GGGGGGGGGA (2) GTAACTTGAC GTGGGTCAGT (3) GTGTATCTTT (2) TACACTACAA TACCAGCGTA TTAAACCTCA 107.1 0.1071 P6.5 retina AAAGTGGACC (2) CCTTGGCCTC CTGAGAGCCA (3) GTAACTTGAC GTGTATCTTT (2) TACCAGCGTA TTAAACCTCA TTCATCAGCA (8) 98.3 0.0983 P10.5 crx- retina CCTTGGCCTC CTGAGAGCCA (3) GGGGGGGGGA (2) GTGGGTCAGT (3) GTGTATCTTT (2) TTAAACCCCA TTAAACCTCA 52.1 0.0521 P10.5 crx+ retina AAAGTGGACC (2) CCTTGGCCTC CTGAGAGCCA (3) GGATACAAAA GTAACTTGAC GTGGGTCAGT (3) GTGTATCTTT (2) TACACTACAA TTAAACCTCA 72.9 0.0729 Adult retinal AAAGTGGACC (2) CCTTGGCCTC CTGAGAGCCA (3) GTGTATCTTT (2) TACCAGCGTA TGACTTTCCA TTAAACCTCA TTCATCAGCA (8) 48.4 0.0484 ONL CCTTGGCCTC GTGTATCTTT (2) TACACTACAA TACCAGCGTA TTAAACCTCA 30.6 0.0306