| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGAAAAAAA (3) CAAGGAGCTA (2) CATACATACT (2) GTGTTGAAAA
| 16.3 | 0.0163 |
| Cb medulloblastoma | AAGAAAAAAA (3) CATACATACT (2) CCAAGAGCTA (2)
| 18.5 | 0.0185 |
| P8 GC+1d culture | AAGAAAAAAA (3) CAAGGAGCTA (2) CATACATACT (2)
| 10.3 | 0.0103 |
| P8 GC+SHH+1d culture | AAGAAAAAAA (3) CAAGGAGCTA (2)
| 5.8 | 0.0058 |
| 3T3 fibroblasts | CAAGGAGCTA (2) CATACATACT (2)
| 21 | 0.021 |
| E15 cortex | AAGAAAAAAA (3) CAAGGAGCTA (2)
| 29.6 | 0.0296 |
| P1 cortex | AAGAAAAAAA (3) CTGCGGGCCG (4)
| 13.6 | 0.0136 |
| Hypothalamus | AAGAAAAAAA (3) CAAGGAGCTA (2) GTGTTGAAAA
| 7.2 | 0.0072 |
| E12.5 retina | AAGAAAAAAA (3) CAAGGAGCTA (2)
| 3.8 | 0.0038 |
| E14.5 retina | AAGAAAAAAA (3) CATACATACT (2) GTGTTGAAAA
| 5.4 | 0.0054 |
| E16.5 retina | AAGAAAAAAA (3) CAAGGAGCTA (2)
| 3.6 | 0.0036 |
| E18.5 retina | AAGAAAAAAA (3) CAAGGAGCTA (2) CCAAGAGCTA (2) GTGTTGAAAA
| 12.7 | 0.0127 |
| P0.5 retina | AAGAAAAAAA (3) CTGCGGGCCG (4)
| 4 | 0.004 |
| P2.5 retina | AAGAAAAAAA (3) CAAGGAGCTA (2) CTGCGGGCCG (4) GTGTTGAAAA
| 15.9 | 0.0159 |
| P4.5 retina | AAGAAAAAAA (3) CAAGGAGCTA (2)
| 7.9 | 0.0079 |
| P6.5 retina | AAGAAAAAAA (3) CAAGGAGCTA (2) CTGCGGGCCG (4) GTGTTGAAAA
| 13.4 | 0.0134 |
| P10.5 crx- retina | AAGAAAAAAA (3) CAAGGAGCTA (2)
| 16.8 | 0.0168 |
| P10.5 crx+ retina | AAGAAAAAAA (3) CAAGGAGCTA (2) GTGTTGAAAA
| 7.6 | 0.0076 |
| Adult retinal | AAGAAAAAAA (3) CAAGGAGCTA (2) CCAAGAGCTA (2)
| 7.5 | 0.0075 |
| ONL | AAGAAAAAAA (3)
| 3.8 | 0.0038 |