| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGCCTTTGT (2) GTTAAAAAAA (2) TCTGGGTGTG
| 21.2 | 0.0212 |
| Cb medulloblastoma | GTTAAAAAAA (2)
| 25.4 | 0.0254 |
| P8 GC+1d culture | AAGCCTTTGT (2) GTTAAAAAAA (2) TCTGGGTGTG
| 19.4 | 0.0194 |
| P8 GC+SHH+1d culture | AAGCCTTTGT (2) ATGCCTTTGT (2) GCCTGCTCAA GTTAAAAAAA (2) TCTGGGTGTG
| 35.2 | 0.0352 |
| 3T3 fibroblasts | AAGCCTTTGT (2) TCTGGGTGTG
| 52.5 | 0.0525 |
| E15 cortex | AAGCCTTTGT (2)
| 4.9 | 0.0049 |
| P1 cortex | GTTAAAAAAA (2) TCTGGGTGTG
| 9 | 0.009 |
| Hypothalamus | GTTAAAAAAA (2)
| 9.1 | 0.0091 |
| E12.5 retina | AAGCCTTTGT (2) GTTAAAAAAA (2) TCTGGGTGTG
| 20.7 | 0.0207 |
| E14.5 retina | AAGCCTTTGT (2) GTTAAAAAAA (2) TCTGGGTGTG
| 23.6 | 0.0236 |
| E16.5 retina | AAGCCTTTGT (2) GTTAAAAAAA (2) TCCCCAACCT TCTGGGTGTG
| 30.7 | 0.0307 |
| E18.5 retina | GCCTGCTCAA GTCATAATCA (2) GTTAAAAAAA (2) TCTGGGTGTG
| 40 | 0.04 |
| P0.5 retina | AAGCCTTTGT (2) GTTAAAAAAA (2)
| 7.8 | 0.0078 |
| P2.5 retina | AAGCCTTTGT (2) GTCATAATCA (2) GTTAAAAAAA (2) TCTGGGTGTG
| 19.4 | 0.0194 |
| P4.5 retina | GTTAAAAAAA (2) TCTGGGTGTG
| 15.9 | 0.0159 |
| P6.5 retina | AAGCCTTTGT (2) GTTAAAAAAA (2)
| 18.3 | 0.0183 |
| P10.5 crx- retina | AAGCCTTTGT (2) ATGCCTTTGT (2) GTTAAAAAAA (2) TCCCCAACCT
| 33.5 | 0.0335 |
| P10.5 crx+ retina | GTTAAAAAAA (2) TCTGGGTGTG
| 17.3 | 0.0173 |
| Adult retinal | AAGCCTTTGT (2) ATGCCTTTGT (2)
| 3.8 | 0.0038 |
| ONL | AAGCCTTTGT (2) GCCTGCTCAA GTTAAAAAAA (2)
| 7.6 | 0.0076 |