| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGTTCAAGGC (2) TAGGCCAGGT
| 4.9 | 0.0049 |
| Cb medulloblastoma | TAGGCCAGGT TGGTCAATAA (2)
| 4.6 | 0.0046 |
| P8 GC+1d culture | ACTCTTTCCT (3) AGTTCAAGGC (2) TAGGCCAGGT TCTCCATTCC TGGTCAATAA (2)
| 10.1 | 0.0101 |
| P8 GC+SHH+1d culture | AGTTCAAGGC (2) GCGGGGCCGC GGTGGGCAGG (3) TAGGCCAGGT TGGTCAATAA (2)
| 14.1 | 0.0141 |
| 3T3 fibroblasts | GCGGGGCCGC
| 3.5 | 0.0035 |
| E15 cortex | AGTTCAAGGC (2) GGTGGGCAGG (3) TAGGCCAGGT
| 14.7 | 0.0147 |
| P1 cortex | AGTTCAAGGC (2) TGGTCAATAA (2)
| 9 | 0.009 |
| Hypothalamus | ACTCTTTCCT (3) GGTGGGCAGG (3) TAGGCCAGGT TCTCCATTCC
| 7.2 | 0.0072 |
| E12.5 retina | ACTCTTTCCT (3) AGTTCAAGGC (2) TAGGCCAGGT TGGTCAATAA (2)
| 17 | 0.017 |
| E14.5 retina | ACTCTTTCCT (3) GCGGGGCCGC TAGGCCAGGT
| 9.1 | 0.0091 |
| E16.5 retina | ACTCTTTCCT (3) AGTTCAAGGC (2) TAGGCCAGGT
| 10.8 | 0.0108 |
| E18.5 retina | AGTTCAAGGC (2) TAGGCCAGGT TGGTCAATAA (2)
| 9.1 | 0.0091 |
| P0.5 retina | AGTTCAAGGC (2) GGTGGGCAGG (3) TAGGCCAGGT TCTCCATTCC
| 9.9 | 0.0099 |
| P2.5 retina | AGTTCAAGGC (2) TAGGCCAGGT
| 8.8 | 0.0088 |
| P4.5 retina | AGTTCAAGGC (2) TAGGCCAGGT TGGTCAATAA (2)
| 11.9 | 0.0119 |
| P6.5 retina | AGTTCAAGGC (2) TAGGCCAGGT TGGTCAATAA (2)
| 8.4 | 0.0084 |
| P10.5 crx- retina | ACTCTTTCCT (3) TAGGCCAGGT TGGTCAATAA (2)
| 9.4 | 0.0094 |
| P10.5 crx+ retina | GGTGGGCAGG (3) TGGTCAATAA (2)
| 3.8 | 0.0038 |
| Adult retinal | GGTGGGCAGG (3)
| 1.9 | 0.0019 |
| ONL | AGTTCAAGGC (2) GGTGGGCAGG (3)
| 3.8 | 0.0038 |