Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196538	Rps11	ribosomal protein S11	7		27207
Gene Ontology	intracellular | protein biosynthesis | ribonucleoprotein complex | ribosome | RNA binding | rRNA binding | structural constituent of ribosome
Human Homolog	RPS11[ribosomal protein S11]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTTAAAAAAA (2) TCTGTGCACC TTCTTGTGAC 60.4 0.0604 Cb medulloblastoma GTTAAAAAAA (2) TCTGTGCACC 27.7 0.0277 P8 GC+1d culture ATGCAGAGGA (6) CTGATCCCCA GTTAAAAAAA (2) TCTGTGCACC TGCAAGACTG (2) TTCTTGTGAC 67.3 0.0673 P8 GC+SHH+1d culture CTGATCCCCA GTTAAAAAAA (2) TCTGTGCACC TCTGTGGAAC TGCAAGACTG (2) TTCTTGTGAC 57.4 0.0574 3T3 fibroblasts TCTGTGCACC TTCTTGTGAC 175.2 0.1752 E15 cortex GCTGCTGGAC TCTGTGCACC 59.3 0.0593 P1 cortex GTTAAAAAAA (2) TCTGTGCACC 27.2 0.0272 Hypothalamus ATGCAGAGGA (6) GTTAAAAAAA (2) TCTGTGCACC 27.2 0.0272 E12.5 retina GTTAAAAAAA (2) TCTGTGCACC 50.7 0.0507 E14.5 retina GTTAAAAAAA (2) TCTGTGCACC TTCTTGTGAC 47.4 0.0474 E16.5 retina GTTAAAAAAA (2) TCTGTGCACC TCTGTGCCCC TTCTTGTGAC 50.7 0.0507 E18.5 retina GTTAAAAAAA (2) TCTGTGCACC TGCAAGACTG (2) 43.6 0.0436 P0.5 retina CTGATCCCCA GTTAAAAAAA (2) TCTGTGCACC TCTGTGGAAC TGCAAGACTG (2) TTCTTGTGAC 55 0.055 P2.5 retina ATGCAGAGGA (6) GCTGCTGGAC GTTAAAAAAA (2) TCTGTGCACC TCTGTGGAAC 28.2 0.0282 P4.5 retina GTTAAAAAAA (2) TCTGTGCACC TTCTTGTGAC 29.8 0.0298 P6.5 retina CTGATCCCCA GTTAAAAAAA (2) TCTGTGCACC 41.6 0.0416 P10.5 crx- retina GTTAAAAAAA (2) TCTGTGCACC 72.5 0.0725 P10.5 crx+ retina GTTAAAAAAA (2) TCTGTGCACC 40.4 0.0404 Adult retinal TCTGTGCACC TTCTTGTGAC 20.4 0.0204 ONL GCTGCTGGAC GTTAAAAAAA (2) TCTGTGCACC TCTGTGCCCC TGCAAGACTG (2) 47.8 0.0478