Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196564	D8Ertd158e	DNA segment, Chr 8, ERATO Doi 158, expressed	8	8 53.0 cM	52186
Mm.196564	Atbf1	AT motif binding factor 1	8		11906
Gene Ontology	DNA binding | mitochondrion | nucleic acid binding | nucleus | regulation of transcription, DNA-dependent | transcription factor activity | zinc ion binding
Human Homolog	ATBF1[AT-binding transcription factor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTCAACACA (2) CTTTAAAAAA (3) GAGACTAACA (2) TGTGTGTGTG (2) 34.2 0.0342 Cb medulloblastoma CTTTAAAAAA (3) TGTGTGTGTG (2) 39.3 0.0393 P8 GC+1d culture ATTCAACACA (2) CTTTAAAAAA (3) GTACAAAAAA (2) TGTGTGTGTG (2) 31.9 0.0319 P8 GC+SHH+1d culture ATTCAACACA (2) CACTGTATGG (4) CTTTAAAAAA (3) GTACAAAAAA (2) TGTGTGTGTG (2) 34 0.034 3T3 fibroblasts TGTGTGTGTG (2) 28 0.028 P1 cortex CTTTAAAAAA (3) TGTGTGTGTG (2) 22.7 0.0227 Hypothalamus CTTTAAAAAA (3) TGTGTGTGTG (2) 30.8 0.0308 E12.5 retina ATTCAACACA (2) CTTTAAAAAA (3) GAGACTAACA (2) TGTGTGTGTG (2) 48.9 0.0489 E14.5 retina GAGACTAACA (2) TGTGTGTGTG (2) 56.5 0.0565 E16.5 retina ATTCAACACA (2) CACTGTATGG (4) CTTTAAAAAA (3) GAGACTAACA (2) TGTGTGTGTG (2) 50.6 0.0506 E18.5 retina CACTGTATGG (4) CTTTAAAAAA (3) TATTTTGGTA (2) TGTGTGTGTG (2) 80 0.08 P0.5 retina ATTCAACACA (2) CTTTAAAAAA (3) GTACAAAAAA (2) TATTTTGGTA (2) TGTGTGTGTG (2) 29.6 0.0296 P2.5 retina ATTCAACACA (2) CACTGTATGG (4) CTTTAAAAAA (3) GAGACTAACA (2) TGTGTGTGTG (2) 52.9 0.0529 P4.5 retina ATTCAACACA (2) CACTGTATGG (4) CTTTAAAAAA (3) TGTGTGTGTG (2) 75.3 0.0753 P6.5 retina CACTGTATGG (4) CTTTAAAAAA (3) GAGACTAACA (2) GTACAAAAAA (2) TGTGTGTGTG (2) 61.7 0.0617 P10.5 crx- retina CACTGTATGG (4) CTTTAAAAAA (3) GAGACTAACA (2) TGTGTGTGTG (2) 65.1 0.0651 P10.5 crx+ retina ATTCAACACA (2) CTTTAAAAAA (3) TGTGTGTGTG (2) 51.9 0.0519 Adult retinal CTTTAAAAAA (3) TGTGTGTGTG (2) 61.1 0.0611 ONL CTTTAAAAAA (3) TGTGTGTGTG (2) 24.9 0.0249