Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196884	Cpsf4	cleavage and polyadenylation specific factor 4	5		54188
Gene Ontology	mRNA processing | nucleic acid binding | nucleus | RNA binding
Human Homolog	CPSF4[cleavage and polyadenylation specific factor 4, 30kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATCCACCCGT CAGAGGCCGC CCTGAGTGCT (3) CCTGGCCTTT 6.4 0.0064 Cb medulloblastoma CAGAGTCAAA CCTGAGTGCT (3) TGCTTCAGTT TGGGGGCTGT 9.2 0.0092 P8 GC+1d culture ATCCACCCGT CAGAGGCCGC 6.8 0.0068 P8 GC+SHH+1d culture ATCCACCCGT CAGAGGCCGC TGGGGGCTGT 11.8 0.0118 3T3 fibroblasts CAGAGGCCGC TGGGGGCTGT 7 0.007 E15 cortex ATCCACCCGT CAGAGGCCGC CCTGAGTGCT (3) CCTGGCCTTT 34.5 0.0345 P1 cortex CAGAGGCCGC CAGAGTCAAA GTCCCCTGTG 13.5 0.0135 Hypothalamus CAGAGTCAAA 9.1 0.0091 E12.5 retina ATCCACCCGT CAGAGGCCGC TGCTTCAGTT 17 0.017 E14.5 retina CAGAGGCCGC CCTGGCCTTT GTCCCCTGTG 10.9 0.0109 E16.5 retina CAGAGGCCGC CAGAGTCAAA GTCCCCTGTG TGCTTCAGTT 16.3 0.0163 E18.5 retina CAGAGGCCGC CAGAGTCAAA CCTGAGTGCT (3) 5.4 0.0054 P0.5 retina CAGAGTCAAA GTCCCCTGTG 4 0.004 P2.5 retina CAGAGGCCGC CAGAGTCAAA 10.5 0.0105 P4.5 retina CAGAGGCCGC CAGAGTCAAA CCTGAGTGCT (3) 17.8 0.0178 P6.5 retina ATCCACCCGT CAGAGGCCGC CAGAGTCAAA TGGGGGCTGT 25 0.025 P10.5 crx- retina CAGAGGCCGC CAGAGTCAAA 14.8 0.0148 P10.5 crx+ retina ATCCACCCGT CAGAGGCCGC CAGAGTCAAA 17.3 0.0173 Adult retinal ATCCACCCGT CAGAGGCCGC CAGAGTCAAA CCTGGCCTTT 26 0.026 ONL CAGAGGCCGC CAGAGTCAAA CCTGAGTGCT (3) CCTGGCCTTT 15.3 0.0153