Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.197387	1700129O19Rik	RIKEN cDNA 1700129O19 gene	13		78643
Mm.197387	Bicd2	bicaudal D homolog 2 (Drosophila)	13		76895
Mm.197387	D10Mgi11	DNA Segment, Chr 10, Mouse Genome Informatics 11	10		103083
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGAGGAAGG (4) GAGGAGATCC (2) GCTGATGGCG (3) GGGAAAAAAA (5) GTGATTTGGA (3) 13 0.013 Cb medulloblastoma CAGAGGAAGG (4) GAGGAGATCC (2) GCTGATGGCG (3) GGGAAAAAAA (5) TGCTGCCAAG TTTGCCACCA (4) 110.9 0.1109 P8 GC+1d culture GCTGATGGCG (3) GGGAAAAAAA (5) 9.1 0.0091 P8 GC+SHH+1d culture CGAGTGGGGA (3) GCTGATGGCG (3) GGGAAAAAAA (5) 12.9 0.0129 3T3 fibroblasts CAGAGGAAGG (4) GCTGATGGCG (3) 21 0.021 E15 cortex GCTGATGGCG (3) 19.8 0.0198 P1 cortex CATATGACTT (3) CGAGTGGGGA (3) GCTGATGGCG (3) GGGAAAAAAA (5) 22.6 0.0226 Hypothalamus CAGAGGAAGG (4) CATATGACTT (3) GAAATGAAGG (4) GCTGATGGCG (3) GGGAAAAAAA (5) 52.5 0.0525 E12.5 retina GCTGATGGCG (3) 5.6 0.0056 E14.5 retina CAGAGGAAGG (4) GCTGATGGCG (3) GGGAAAAAAA (5) 7.2 0.0072 E16.5 retina CAGAGGAAGG (4) GAAATGAAGG (4) GCTGATGGCG (3) GGGAAAAAAA (5) GTGATTTGGA (3) 19.9 0.0199 E18.5 retina GCTGATGGCG (3) GGGAAAAAAA (5) GTGATTTGGA (3) TGCTGCCAAG 10.8 0.0108 P0.5 retina CAGAGGAAGG (4) GCTGATGGCG (3) GGGAAAAAAA (5) GTGATTTGGA (3) 11.8 0.0118 P2.5 retina CAGAGGAAGG (4) GAAATGAAGG (4) GAGGAGATCC (2) GCTGATGGCG (3) GGGAAAAAAA (5) GTGATTTGGA (3) 24.8 0.0248 P4.5 retina GCTGATGGCG (3) GGGAAAAAAA (5) GTGATTTGGA (3) 21.8 0.0218 P6.5 retina CAGAGGAAGG (4) GCTGATGGCG (3) GGGAAAAAAA (5) GTGATTTGGA (3) TTTGCCACCA (4) 33.4 0.0334 P10.5 crx- retina CATATGACTT (3) GAAATGAAGG (4) GCTGATGGCG (3) GGGAAAAAAA (5) 18.6 0.0186 P10.5 crx+ retina CGAGTGGGGA (3) GCTGATGGCG (3) GGGAAAAAAA (5) GTGATTTGGA (3) TTTGCCACCA (4) 50 0.05 Adult retinal GCTGATGGCG (3) GGGAAAAAAA (5) 38.9 0.0389 ONL GGGAAAAAAA (5) 30.6 0.0306