| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGGTCCTGGG ATTAAAAAAA (2) ATTAAACACA (2) GAATACTTTG
| 6.4 | 0.0064 |
| P8 GC+1d culture | ATTAAAAAAA (2) GGGCTGCTCG
| 3.4 | 0.0034 |
| P8 GC+SHH+1d culture | ATTAAAAAAA (2) ATTAAACACA (2) GCAGCAGCTC (4)
| 8.2 | 0.0082 |
| 3T3 fibroblasts | ATTAAAAAAA (2) GCAGCAGCTC (4)
| 10.5 | 0.0105 |
| E15 cortex | GGGCTGCTCG
| 4.9 | 0.0049 |
| P1 cortex | ATTAAACACA (2)
| 4.5 | 0.0045 |
| Hypothalamus | ATTAAAAAAA (2)
| 3.6 | 0.0036 |
| E12.5 retina | ATTAAAAAAA (2)
| 1.9 | 0.0019 |
| E14.5 retina | ATTAAAAAAA (2) ATTAAACACA (2) ATTAAACCCA (3) GAATACTTTG
| 19.9 | 0.0199 |
| E16.5 retina | ATTAAAAAAA (2) ATTAAACACA (2) GGGCTGCTCG
| 7.2 | 0.0072 |
| E18.5 retina | ATTAAAAAAA (2)
| 9.1 | 0.0091 |
| P2.5 retina | ATTAAAAAAA (2) ATTAAACACA (2) ATTAAACCCA (3) GCAGCAGCTC (4)
| 8.9 | 0.0089 |
| P4.5 retina | ATTAAAAAAA (2) ATTAAACACA (2)
| 4 | 0.004 |
| P6.5 retina | AGGTCCTGGG ATTAAACACA (2)
| 6.7 | 0.0067 |
| P10.5 crx- retina | ATTAAAAAAA (2) ATTAAACACA (2) ATTAAACCCA (3)
| 5.7 | 0.0057 |
| P10.5 crx+ retina | ATTAAACACA (2)
| 1.9 | 0.0019 |
| Adult retinal | AGGTCCTGGG
| 1.9 | 0.0019 |