Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.19892
Whsc1
Wolf-Hirschhorn syndrome candidate 1 (human)
5
107823
Mm.19892
D930023B08Rik
RIKEN cDNA D930023B08 gene
5
319421
Mm.19892
C130020C13Rik
RIKEN cDNA C130020C13 gene
5
319602
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 31 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATGGTGATGT
TGCGGAAAAA (
2
)
TTAAACACGT
(
3
)
4.8
0.0048
Cb medulloblastoma
ATGGTGATGT
13.9
0.0139
P8 GC+1d culture
AGGACACAAA
GGAGAGAGAA (
2
)
TTAAACACGT
(
3
)
3.3
0.0033
P8 GC+SHH+1d culture
GGAGAGAGAA (
2
)
TGCGGAAAAA (
2
)
2.4
0.0024
3T3 fibroblasts
ATGGTGATGT
3.5
0.0035
E15 cortex
ATGGTGATGT
TGCGGAAAAA (
2
)
14.8
0.0148
P1 cortex
ATGGTGATGT
4.5
0.0045
Hypothalamus
ATGGTGATGT
GGAGGAAAGG
(
5
)
5.4
0.0054
E12.5 retina
ATGGTGATGT
GGAGAGAGAA (
2
)
9.4
0.0094
E14.5 retina
ATGGTGATGT
TGCGGAAAAA (
2
)
9.1
0.0091
E16.5 retina
ATGGTGATGT
GGAGGAAAGG
(
5
)
9
0.009
E18.5 retina
ATGGTGATGT
TGCGGAAAAA (
2
)
9.1
0.0091
P2.5 retina
ATGGTGATGT
GGAGAGAGAA (
2
)
7.1
0.0071
P4.5 retina
GGAGAGAGAA (
2
)
GGAGGAAAGG
(
5
)
4
0.004
P6.5 retina
TTAAACACGT
(
3
)
1.7
0.0017
P10.5 crx- retina
AGGACACAAA
1.9
0.0019
Adult retinal
ATGGTGATGT
3.7
0.0037
ONL
AGGACACAAA
1.9
0.0019
