Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.19992	Ttrap	Traf and Tnf receptor associated protein	13	13 12.0 cM	56196
Gene Ontology	biological_process unknown | cellular_component unknown | endonuclease activity | phosphoric diester hydrolase activity | receptor activity
Human Homolog	TTRAP[TRAF and TNF receptor associated protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 29 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGATACGAAA TAATTGAAAA 3.2 0.0032 Cb medulloblastoma GGATACGAAA GGGGCTCTGT (2) TAATTGAAAA 9.2 0.0092 P8 GC+1d culture CTTATGTCAG GGGGCTCTGT (2) 5.7 0.0057 P8 GC+SHH+1d culture CTTATGTCAG GGATACGAAA GGGGCTCTGT (2) 5.9 0.0059 3T3 fibroblasts GGGGCTCTGT (2) 3.5 0.0035 P1 cortex GGGGCTCTGT (2) 4.5 0.0045 E12.5 retina GGGGCTCTGT (2) 5.6 0.0056 E14.5 retina CTTATGTCAG GGGGCTCTGT (2) 5.4 0.0054 E16.5 retina GGGGCTCTGT (2) 10.9 0.0109 E18.5 retina GGGGCTCTGT (2) TAATTGAAAA 5.4 0.0054 P0.5 retina GGGGCTCTGT (2) 5.9 0.0059 P2.5 retina GGGGCTCTGT (2) 24.6 0.0246 P4.5 retina CTTATGTCAG GGGGCTCTGT (2) 47.6 0.0476 P6.5 retina CTTATGTCAG GGGGCTCTGT (2) 35 0.035 P10.5 crx- retina GGGGCTCTGT (2) 9.3 0.0093 P10.5 crx+ retina GGGGCTCTGT (2) 34.6 0.0346 Adult retinal GGGGCTCTGT (2) 7.4 0.0074 ONL CTTATGTCAG GGGGCTCTGT (2) 9.6 0.0096