Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.20000	Dhx9	DEAH (Asp-Glu-Ala-His) box polypeptide 9	1	1 77.0 cM	13211
Gene Ontology	ATP binding | ATP dependent helicase activity | DNA binding | double-stranded RNA binding | helicase activity | intracellular | nucleic acid binding | nucleus | RNA binding | RNA helicase activity
Human Homolog	DHX9[DEAH (Asp-Glu-Ala-His) box polypeptide 9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAGCTCTGG (2) TCTCAGTTGA (3) TGTAGTTTCA TTCTGTGAAT 26.1 0.0261 Cb medulloblastoma TCTCAGTTGA (3) TGTAGTTTCA TTCTGTGAAT 13.8 0.0138 P8 GC+1d culture GAAGCTCTGG (2) TAATCAGAAA (2) TCTCAGTTGA (3) TGTAGTTTCA TTCTGTGAAT 37.6 0.0376 P8 GC+SHH+1d culture TAATCAGAAA (2) TCTCAGTTGA (3) TGTAGTTTCA TTCTGTGAAT 43.3 0.0433 3T3 fibroblasts TCTCAGTTGA (3) TTCTGTGAAT 10.5 0.0105 E15 cortex TAATCAGAAA (2) TTCTGTGAAT 9.8 0.0098 P1 cortex GAAGCTCTGG (2) TAATCAGAAA (2) TGTAGTTTCA 18.1 0.0181 Hypothalamus TCTCAGTTGA (3) TGTAGTTTCA TTCTGTGAAT 9 0.009 E12.5 retina TCTCAGTTGA (3) TGTAGTTTCA TTCTGTGAAT 16.9 0.0169 E14.5 retina TGTAGTTTCA TTCTGTGAAT 7.3 0.0073 E16.5 retina TCTCAGTTGA (3) TGTAGTTTCA TTCTGTGAAT 12.6 0.0126 E18.5 retina TAATCAGAAA (2) TCTCAGTTGA (3) TGTAGTTTCA 20 0.02 P0.5 retina TGTAGTTTCA TTCTGTGAAT 13.8 0.0138 P2.5 retina TAATCAGAAA (2) TGTAGTTTCA TTCTGTGAAT 15.9 0.0159 P4.5 retina TAATCAGAAA (2) TCTCAGTTGA (3) TGTAGTTTCA TTCTGTGAAT 17.8 0.0178 P6.5 retina TCTCAGTTGA (3) TGTAGTTTCA 6.7 0.0067 P10.5 crx- retina TAATCAGAAA (2) 1.9 0.0019 P10.5 crx+ retina TAATCAGAAA (2) TCTCAGTTGA (3) TGTAGTTTCA 11.5 0.0115 Adult retinal TGTAGTTTCA TTCTGTGAAT 9.3 0.0093 ONL TGTAGTTTCA 3.8 0.0038