Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.200446
C630002B14Rik
RIKEN cDNA C630002B14 gene
10
103466
Mm.200446
Gnn
Grp94 neighboring nucleotidase
10
380646
Human Homolog
TU12B1-TY[TU12B1-TY protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACACTTTTGT
(
2
)
TGAACCTGAG
16.3
0.0163
Cb medulloblastoma
TGAACCTGAG
2.3
0.0023
P8 GC+1d culture
ACACTTTTGT
(
2
)
CTGAGAGCCA (
3
)
TGAACCTGAG
27.3
0.0273
P8 GC+SHH+1d culture
ACACTTTTGT
(
2
)
CTGAGAGCCA (
3
)
TGAACCTGAG
15.3
0.0153
3T3 fibroblasts
ACACTTTTGT
(
2
)
CTGAGAGCCA (
3
)
7
0.007
E15 cortex
CTGAGAGCCA (
3
)
TGAACCTGAG
19.7
0.0197
P1 cortex
ACACTTTTGT
(
2
)
CTGAGAGCCA (
3
)
TGAACCTGAG
36.3
0.0363
Hypothalamus
ACACTTTTGT
(
2
)
TGAACCTGAG
5.4
0.0054
E12.5 retina
TGAACCTGAG
15
0.015
E14.5 retina
TGAACCTGAG
5.5
0.0055
E16.5 retina
CTGAGAGCCA (
3
)
TGAACCTGAG
3.6
0.0036
E18.5 retina
TGAACCTGAG
3.6
0.0036
P0.5 retina
ACACTTTTGT
(
2
)
CTGAGAGCCA (
3
)
TGAACCTGAG
11.8
0.0118
P2.5 retina
CTGAGAGCCA (
3
)
TGAACCTGAG
12.3
0.0123
P4.5 retina
TGAACCTGAG
7.9
0.0079
P6.5 retina
ACACTTTTGT
(
2
)
CTGAGAGCCA (
3
)
TGAACCTGAG
11.6
0.0116
P10.5 crx- retina
ACACTTTTGT
(
2
)
CTGAGAGCCA (
3
)
TGAACCTGAG
11.2
0.0112
P10.5 crx+ retina
CTGAGAGCCA (
3
)
TGAACCTGAG
3.8
0.0038
Adult retinal
CTGAGAGCCA (
3
)
TGAACCTGAG
3.8
0.0038
ONL
TGAACCTGAG
1.9
0.0019
