| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAATTGCGGA (2) GATGATGAAG (2) GCAGCTCACA TGGGTGCTAG (4) TGGTTGCTGG
| 91.4 | 0.0914 |
| Cb medulloblastoma | GAATTGCGGA (2) GCAGCTCACA GGGGGAGGGG (4) TGGTTGCTGG
| 127.1 | 0.1271 |
| P8 GC+1d culture | GAATTGCGGA (2) GCAGCTCACA GGGGGAGGGG (4) TGGTTGCTGG
| 70.8 | 0.0708 |
| P8 GC+SHH+1d culture | GAATTGCGGA (2) GATGATGAAG (2) GCAGCTCACA GGAAGTCAGG TGGTTGCTGG
| 105.4 | 0.1054 |
| 3T3 fibroblasts | GAATTGCGGA (2) GCAGCTCACA GGGGGAGGGG (4) TGGTTGCTGG
| 252.3 | 0.2523 |
| E15 cortex | GCAGCTCACA TGGGTGCTAG (4) TGGTTGCTGG
| 306.7 | 0.3067 |
| P1 cortex | GAATTGCGGA (2) GCAGCTCACA GGGGGAGGGG (4) TCCAGGATAA (3) TGGTTGCTGG
| 104.4 | 0.1044 |
| Hypothalamus | GAATTGCGGA (2) GATGATGAAG (2) GCAGCTCACA TCCAGGATAA (3) TGGGTGCTAG (4) TGGTTGCTGG TGTATATGTG (3)
| 367.6 | 0.3676 |
| E12.5 retina | GAATTGCGGA (2) GATGATGAAG (2) GCAGCTCACA GGGGGAGGGG (4) TGGTTGCTGG
| 195.3 | 0.1953 |
| E14.5 retina | GAATTGCGGA (2) GATGATGAAG (2) GCAGCTCACA GGAACCAAGC (3) TCCAGGATAA (3) TGGGGGATTC (2) TGGGTGCTAG (4) TGGTTGCTGG
| 991 | 0.991 |
| E16.5 retina | GAATTGCGGA (2) GATGATGAAG (2) GCAGCTCACA TGGTTGCTGG TGTATATGTG (3)
| 798.6 | 0.7986 |
| E18.5 retina | GAATTGCGGA (2) GATGATGAAG (2) GCAGCTCACA GGGGGAGGGG (4) TGGGGGATTC (2) TGGTTGCTGG TGTATATGTG (3)
| 281.9 | 0.2819 |
| P0.5 retina | GAATTGCGGA (2) GATGATGAAG (2) GCAGCTCACA GGAACCAAGC (3) GGAAGTCAGG TGGTTGCTGG TGTATATGTG (3)
| 219.9 | 0.2199 |
| P2.5 retina | GAATTGCGGA (2) GCAGCTCACA GGAAGTCAGG GGGGGAGGGG (4) TGGGTGCTAG (4) TGGTTGCTGG TGTATATGTG (3)
| 197.1 | 0.1971 |
| P4.5 retina | GAATTGCGGA (2) GATGATGAAG (2) GCAGCTCACA TGGTTGCTGG
| 166.4 | 0.1664 |
| P6.5 retina | GAATTGCGGA (2) GATGATGAAG (2) GCAGCTCACA GGGGGAGGGG (4) TCCAGGATAA (3) TGGTTGCTGG TGTATATGTG (3)
| 181.8 | 0.1818 |
| P10.5 crx- retina | GAATTGCGGA (2) GATGATGAAG (2) GCAGCTCACA GGAAGTCAGG GGGGGAGGGG (4) TGGGTGCTAG (4) TGGTTGCTGG TGTATATGTG (3)
| 334.6 | 0.3346 |
| P10.5 crx+ retina | GAATTGCGGA (2) GCAGCTCACA GGGGGAGGGG (4) TGGGTGCTAG (4) TGGTTGCTGG
| 130.7 | 0.1307 |
| Adult retinal | GAATTGCGGA (2) GCAGCTCACA GGGGGAGGGG (4) TGGGTGCTAG (4) TGGTTGCTGG TGTATATGTG (3)
| 242.7 | 0.2427 |
| ONL | GAATTGCGGA (2) GATGATGAAG (2) GCAGCTCACA TGGGTGCTAG (4) TGGTTGCTGG TGTATATGTG (3)
| 419.4 | 0.4194 |