Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.20129	Pspc1	paraspeckle protein 1	14		66645
Mm.20129	C030013D06Rik	RIKEN cDNA C030013D06 gene	14		77376
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTCCCACCC (2) GGAAAATAAA (2) GGAGATGCAT (2) GGGGTTAAGA (2) TAATAAAGAA (2) TCTGTTACTA (3) 14.6 0.0146 Cb medulloblastoma CCTCCCACCC (2) GGAGATGCAT (2) GGGGTTAAGA (2) TAATAAAGAA (2) 13.8 0.0138 P8 GC+1d culture CCTCCCACCC (2) CTCAAGGCCC (3) GGAGATGCAT (2) GGGGTTAAGA (2) TCTGTTACTA (3) 21.6 0.0216 P8 GC+SHH+1d culture GGAGATGCAT (2) TAATAAAGAA (2) 5.9 0.0059 3T3 fibroblasts CCTCCCACCC (2) 3.5 0.0035 E15 cortex CCTCCCACCC (2) 4.9 0.0049 P1 cortex CCTCCCACCC (2) TAATAAAGAA (2) TCTGTTACTA (3) 13.5 0.0135 Hypothalamus CCTCCCACCC (2) GGAAAATAAA (2) GGAGATGCAT (2) GGGGTTAAGA (2) TAATAAAGAA (2) 12.6 0.0126 E12.5 retina CCTCCCACCC (2) GGGGTTAAGA (2) TAATAAAGAA (2) TCTGTTACTA (3) 17 0.017 E14.5 retina CTCAAGGCCC (3) GGGGTTAAGA (2) TCTGTTACTA (3) 5.4 0.0054 E16.5 retina CCTCCCACCC (2) 10.9 0.0109 E18.5 retina CCTCCCACCC (2) GGGGTTAAGA (2) TAATAAAGAA (2) 10.9 0.0109 P0.5 retina CCTCCCACCC (2) CTCAAGGCCC (3) 5.9 0.0059 P2.5 retina CCTCCCACCC (2) GGAAAATAAA (2) GGGGTTAAGA (2) 5.4 0.0054 P4.5 retina CCTCCCACCC (2) GGGGTTAAGA (2) TAATAAAGAA (2) 12 0.012 P6.5 retina CTCAAGGCCC (3) TCTGTTACTA (3) 3.4 0.0034 P10.5 crx- retina CCTCCCACCC (2) CTCAAGGCCC (3) TAATAAAGAA (2) 5.7 0.0057 P10.5 crx+ retina CCTCCCACCC (2) TAATAAAGAA (2) TCTGTTACTA (3) 9.6 0.0096 Adult retinal CCTCCCACCC (2) GGAGATGCAT (2) GGGGTTAAGA (2) TCTGTTACTA (3) 11.2 0.0112 ONL TAATAAAGAA (2) 1.9 0.0019