Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2025	Smn1	survival motor neuron 1	13	13 D1/D2.1 (13 54.0 cM)	20595
Gene Ontology	cytoplasm | mRNA processing | nucleic acid binding | nucleus | RNA binding
Human Homolog	SMN1[survival of motor neuron 1, telomeric]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 17 In Situ Hybridization Images

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SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTGGCTACC (2) TCAAGATTTT TTTGTGTGTG 8.1 0.0081 Cb medulloblastoma AGTGGCTACC (2) TCAAGATTTT TTTGTGTGTG 11.5 0.0115 P8 GC+1d culture TCAAGATTTT 4.6 0.0046 P8 GC+SHH+1d culture TCAAGATTTT TTTGTGTGTG 4.7 0.0047 3T3 fibroblasts AGTGGCTACC (2) TGCAGGCTGG (2) 14 0.014 E15 cortex AGTGGCTACC (2) 4.9 0.0049 P1 cortex TTTGTGTGTG 4.5 0.0045 Hypothalamus TCAAGATTTT 9.1 0.0091 E12.5 retina AGTGGCTACC (2) TCAAGATTTT TTTGTGTGTG 13.2 0.0132 E14.5 retina TCAAGATTTT 12.8 0.0128 E16.5 retina TCAAGATTTT 9.1 0.0091 E18.5 retina TCAAGATTTT 9.1 0.0091 P2.5 retina CTAAGAAAAT (2) TCAAGATTTT TTTGTGTGTG 12.4 0.0124 P4.5 retina TCAAGATTTT TGCAGGCTGG (2) TTTGTGTGTG 11.9 0.0119 P6.5 retina CTAAGAAAAT (2) TCAAGATTTT 5 0.005 P10.5 crx- retina CTAAGAAAAT (2) TCAAGATTTT 9.3 0.0093 Adult retinal AGTGGCTACC (2) TTTGTGTGTG 3.8 0.0038 ONL TTTGTGTGTG 5.7 0.0057