| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCAGTTTTTA GTGGTATAAT TCAGACGCGG
| 13 | 0.013 |
| Cb medulloblastoma | CAGCTGCAGA (2) CCTCCACCCA GAGTATACAA GCAGTTTTTA GTGGTATAAT
| 11.5 | 0.0115 |
| P8 GC+1d culture | CAGCTGCAGA (2) GAGTATACAA GTGGTATAAT
| 5.6 | 0.0056 |
| P8 GC+SHH+1d culture | CAGCTGCAGA (2) GTGGTATAAT TCAGACGCGG
| 4.7 | 0.0047 |
| 3T3 fibroblasts | CCTCCACCCA GTGGTATAAT TCAGACGCGG
| 24.5 | 0.0245 |
| E15 cortex | CCAGGCACTC TCAGACGCGG TGCAGGGCTG
| 84.1 | 0.0841 |
| Hypothalamus | CAGCTGCAGA (2) GAGTATACAA GTGGTATAAT
| 9 | 0.009 |
| E12.5 retina | TCAGACGCGG
| 1.9 | 0.0019 |
| E14.5 retina | CACCTGCAGA CCAGGCACTC TCAGACGCGG
| 10.9 | 0.0109 |
| E16.5 retina | GTGGTATAAT TCAGACGCGG
| 3.6 | 0.0036 |
| E18.5 retina | TCAGACGCGG TGTCCTGGAA (2)
| 5.4 | 0.0054 |
| P0.5 retina | CCTCCACCCA TCAGACGCGG
| 5.9 | 0.0059 |
| P2.5 retina | GTGGTATAAT
| 3.5 | 0.0035 |
| P4.5 retina | TCAGACGCGG
| 2 | 0.002 |
| P6.5 retina | CACCTGCAGA CCTCCACCCA GTGGTATAAT TGTCCTGGAA (2)
| 10 | 0.01 |
| P10.5 crx- retina | CAGCTGCAGA (2) GAGTATACAA GTGGTATAAT
| 7.5 | 0.0075 |
| P10.5 crx+ retina | CAGCTGCAGA (2) GAGTATACAA GCAGTTTTTA
| 7.6 | 0.0076 |
| Adult retinal | CCTCCACCCA TGCAGGGCTG
| 5.6 | 0.0056 |
| ONL | CCTCCACCCA GAGTATACAA TGCAGGGCTG
| 15.2 | 0.0152 |