Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.20415
Gtf2f2
general transcription factor IIF, polypeptide 2
14
68705
Mm.20415
AU017169
expressed sequence AU017169
14
105588
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 39 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGGTCTCTG
GGAGCTGAAG
(
4
)
TGCCAGCTTG
8.1
0.0081
Cb medulloblastoma
CTGGTCTCTG
CTGTCCTCTG
GGAGCTGAAG
(
4
)
16.2
0.0162
P8 GC+1d culture
AATGTGTCCA
(
3
)
CTGGTCTCTG
3.4
0.0034
P8 GC+SHH+1d culture
AATGTGTCCA
(
3
)
CTGGTCTCTG
CTGTCCTCTG
8.3
0.0083
3T3 fibroblasts
CTGGTCTCTG
3.5
0.0035
E15 cortex
CTGGTCTCTG
GGAGATGAAG (
2
)
9.8
0.0098
P1 cortex
CTGGTCTCTG
4.5
0.0045
Hypothalamus
GGAGCTGAAG
(
4
)
1.8
0.0018
E12.5 retina
AATGTGTCCA
(
3
)
1.9
0.0019
E14.5 retina
CTGGTCTCTG
1.8
0.0018
E18.5 retina
GGAGCTGAAG
(
4
)
TGCCAGCTTG
5.4
0.0054
P0.5 retina
CTGGTCTCTG
2
0.002
P2.5 retina
CTGGTCTCTG
GGAGATGAAG (
2
)
8.8
0.0088
P4.5 retina
CTGGTCTCTG
CTGTCCTCTG
6
0.006
P6.5 retina
CTGGTCTCTG
GGAGATGAAG (
2
)
5
0.005
P10.5 crx- retina
AATGTGTCCA
(
3
)
CTGGTCTCTG
GGAGCTGAAG
(
4
)
11.2
0.0112
P10.5 crx+ retina
AATGTGTCCA
(
3
)
CTGGTCTCTG
GGAGATGAAG (
2
)
GGAGCTGAAG
(
4
)
TGCCAGCTTG
11.4
0.0114
Adult retinal
CTGGTCTCTG
1.9
0.0019
ONL
CTGGTCTCTG
GGAGCTGAAG
(
4
)
TGCCAGCTTG
5.7
0.0057
