| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATTCCGAATT (2) GAGGAGGAGG (2) TAGGCTATCA (2)
| 8.1 | 0.0081 |
| P8 GC+1d culture | TAGGCTATCA (2)
| 6.8 | 0.0068 |
| P8 GC+SHH+1d culture | GAATGTCCAG GAGGAGGAGG (2)
| 2.4 | 0.0024 |
| 3T3 fibroblasts | AAGCTACAGT GAGGAGGAGG (2)
| 63.1 | 0.0631 |
| E15 cortex | GAGGAGGAGG (2)
| 4.9 | 0.0049 |
| P1 cortex | GAATGTCCAG GAGGAGGAGG (2) TAGGCTATCA (2)
| 13.5 | 0.0135 |
| Hypothalamus | GAATGTCCAG GAGGAGGAGG (2) TAGGCTATCA (2)
| 10.8 | 0.0108 |
| E12.5 retina | GAATGTCCAG GAGGAGGAGG (2) TAGGCTATCA (2)
| 9.5 | 0.0095 |
| E14.5 retina | GAATGTCCAG TAGGCTATCA (2)
| 3.6 | 0.0036 |
| E16.5 retina | GAATGTCCAG TAGGCTATCA (2)
| 5.4 | 0.0054 |
| E18.5 retina | TAGGCTATCA (2)
| 1.8 | 0.0018 |
| P0.5 retina | AAGCTACAGT GAATGTCCAG TAGGCTATCA (2)
| 6 | 0.006 |
| P2.5 retina | GAATGTCCAG GAGGAGGAGG (2) TAGGCTATCA (2)
| 10.6 | 0.0106 |
| P4.5 retina | ATTCCGAATT (2) GAATGTCCAG GAGGAGGAGG (2) TAGGCTATCA (2)
| 10 | 0.01 |
| P6.5 retina | ATTCCGAATT (2) GAATGTCCAG
| 5 | 0.005 |
| P10.5 crx- retina | GAGGAGGAGG (2) TAGGCTATCA (2)
| 5.6 | 0.0056 |
| P10.5 crx+ retina | TAGGCTATCA (2)
| 5.8 | 0.0058 |
| Adult retinal | GAGGAGGAGG (2) TAGGCTATCA (2)
| 5.6 | 0.0056 |
| ONL | ATTCCGAATT (2) GAGGAGGAGG (2)
| 5.7 | 0.0057 |