Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.20445	Tspyl1	testis-specific protein, Y-encoded-like 1	10	10 B1	22110
Gene Ontology	DNA binding | nucleosome assembly | nucleus
Human Homolog	TSPYL1[TSPY-like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 12 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCATCCTGTT (2) TGGCCAGAGG (3) 22.8 0.0228 Cb medulloblastoma GCATCCTGTT (2) TGGCAACGTG (2) TGGCCAGAGG (3) 55.5 0.0555 P8 GC+1d culture CTGTTTTGAA (3) GCATCCTGTT (2) TGGCAACGTG (2) TGGCCAGAGG (3) 35.3 0.0353 P8 GC+SHH+1d culture CTGTTTTGAA (3) GCATCCTGTT (2) TGGCAACGTG (2) TGGCCAGAGG (3) 45.7 0.0457 3T3 fibroblasts GCATCCTGTT (2) 7 0.007 E15 cortex GCATCCTGTT (2) 19.8 0.0198 P1 cortex AAAACAATAA GCATCCTGTT (2) 36.3 0.0363 Hypothalamus CTGTTTTGAA (3) GCATCCTGTT (2) TGGCAACGTG (2) 32.6 0.0326 E12.5 retina AAAACAATAA GCATCCTGTT (2) TGGCAACGTG (2) TGGCCAGAGG (3) 22.6 0.0226 E14.5 retina GCATCCTGTT (2) 9.1 0.0091 E16.5 retina AAAACAATAA CTGTTTTGAA (3) GCATCCTGTT (2) TGGCCAGAGG (3) 16.2 0.0162 E18.5 retina GCATCCTGTT (2) TGGCAACGTG (2) TGGCCAGAGG (3) 47.3 0.0473 P0.5 retina GCATCCTGTT (2) TGGCAACGTG (2) 11.8 0.0118 P2.5 retina CTGTTTTGAA (3) GCATCCTGTT (2) TGGCAACGTG (2) TGGCCAGAGG (3) 26.5 0.0265 P4.5 retina CTGTTTTGAA (3) GCATCCTGTT (2) TGGCAACGTG (2) 37.6 0.0376 P6.5 retina CTGTTTTGAA (3) GCATCCTGTT (2) TGGCAACGTG (2) 28.4 0.0284 P10.5 crx- retina AAAACAATAA CTGTTTTGAA (3) GCATCCTGTT (2) TGGCAACGTG (2) TGGCCAGAGG (3) 15 0.015 P10.5 crx+ retina GCATCCTGTT (2) TGGCAACGTG (2) 32.7 0.0327 Adult retinal CTGTTTTGAA (3) GCATCCTGTT (2) TGGCAACGTG (2) TGGCCAGAGG (3) 26.1 0.0261 ONL GCATCCTGTT (2) TGGCCAGAGG (3) 21.1 0.0211