| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CTCCCTGTTG GGGGCAGGGA
| 6.5 | 0.0065 |
| Cb medulloblastoma | CTCCCTGTTG GGGGCAGGGA
| 6.9 | 0.0069 |
| P8 GC+1d culture | CTCCCTGTTG GGGGCAGGGA
| 5.7 | 0.0057 |
| P8 GC+SHH+1d culture | CCCAGCAAGC (2) CTCCCTGTTG GGGGCAGGGA TAGTCCTTTT TCAGGAGAAT
| 14.2 | 0.0142 |
| 3T3 fibroblasts | CAGGAGGGCC (2) CTCCCTGTTG GGGGCAGGGA
| 17.5 | 0.0175 |
| E15 cortex | GGGGCAGGGA
| 9.9 | 0.0099 |
| P1 cortex | TCAGGAGAAT
| 4.5 | 0.0045 |
| Hypothalamus | CCCAGCAAGC (2) TCAGGAGAAT
| 3.6 | 0.0036 |
| E12.5 retina | CTCCCTGTTG GGGGCAGGGA TAGTCCTTTT
| 16.9 | 0.0169 |
| E14.5 retina | CTCCCTGTTG TAGTCCTTTT
| 5.4 | 0.0054 |
| E16.5 retina | CTCCCTGTTG GGGGCAGGGA TCAGGAGAAT
| 10.8 | 0.0108 |
| E18.5 retina | CCCAGCAAGC (2) CTCCCTGTTG GGGGCAGGGA
| 7.2 | 0.0072 |
| P0.5 retina | CTCCCTGTTG GGGGCAGGGA
| 9.9 | 0.0099 |
| P2.5 retina | CTCCCTGTTG GGGGCAGGGA TAGTCCTTTT TCAGGAGAAT
| 12.4 | 0.0124 |
| P4.5 retina | CAGGAGGGCC (2) CTCCCTGTTG GGGGCAGGGA TAGTCCTTTT
| 13.9 | 0.0139 |
| P6.5 retina | CAGGAGGGCC (2) CTCCCTGTTG GGGGCAGGGA TAGTCCTTTT TCAGGAGAAT
| 26.6 | 0.0266 |
| P10.5 crx- retina | CTCCCTGTTG GGGGCAGGGA TCAGGAGAAT
| 7.5 | 0.0075 |
| P10.5 crx+ retina | CTCCCTGTTG GGGGCAGGGA TCAGGAGAAT
| 17.3 | 0.0173 |
| Adult retinal | CAGGAGGGCC (2) GGGGCAGGGA TAGTCCTTTT TCAGGAGAAT
| 22.3 | 0.0223 |
| ONL | TAGTCCTTTT
| 1.9 | 0.0019 |