Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.205601	Cttn	cortactin	7	13 31.0 cM	13043
Gene Ontology	cell cortex | cytoplasm | cytoskeleton | lamellipodium | protein binding
Human Homolog	CTTN[cortactin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 73 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACGAGGCTGG ACTCATCAGA AGGATCAATG CAGACTATGT (2) 14.7 0.0147 Cb medulloblastoma AGGATCAATG CAGACTATGT (2) TGTTTGTGTG (2) 11.5 0.0115 P8 GC+1d culture ACTCATCAGA AGGATCAATG CAGACTATGT (2) CCCCGAAGCA TTTCCCAGAG 26.2 0.0262 P8 GC+SHH+1d culture ACTCATCAGA AGGATCAATG CAGACTATGT (2) GAGGGACCCA (2) 32.8 0.0328 3T3 fibroblasts ACGAGGCTGG AGGATCAATG CCCCGAAGCA GAGGGACCCA (2) 98.1 0.0981 E15 cortex ACTCATCAGA CCCTCCCCCA GAGGGACCCA (2) 24.7 0.0247 P1 cortex ACTCATCAGA 27.3 0.0273 Hypothalamus ACGAGGCTGG ACTCATCAGA AGGATCAATG CAGACTATGT (2) CCCTCCCCCA TGTTTGTGTG (2) TTTCCCAGAG 14.4 0.0144 E12.5 retina ACTCATCAGA AGGATCAATG CAGACTATGT (2) CCCCGAAGCA 16.9 0.0169 E14.5 retina ACTCATCAGA AGGATCAATG CAGACTATGT (2) GAGGGACCCA (2) TGTTTGTGTG (2) 23.6 0.0236 E16.5 retina ACTCATCAGA AGGATCAATG CAGACTATGT (2) 16.2 0.0162 E18.5 retina ACTCATCAGA AGGATCAATG CAGACTATGT (2) 14.6 0.0146 P0.5 retina AGGATCAATG CAGACTATGT (2) CCCTCCCCCA GAGGGACCCA (2) 19.7 0.0197 P2.5 retina AGGATCAATG CAGACTATGT (2) TGTTTGTGTG (2) 19.4 0.0194 P4.5 retina ACTCATCAGA AGGATCAATG CAGACTATGT (2) TGTTTGTGTG (2) 19.8 0.0198 P6.5 retina ACTCATCAGA AGGATCAATG CAGACTATGT (2) TGTTTGTGTG (2) 16.7 0.0167 P10.5 crx- retina ACGAGGCTGG ACTCATCAGA AGGATCAATG CAGACTATGT (2) 15 0.015 P10.5 crx+ retina ACGAGGCTGG AGGATCAATG CAGACTATGT (2) CCCCGAAGCA 11.5 0.0115 Adult retinal AGGATCAATG CAGACTATGT (2) 7.5 0.0075 ONL AGGATCAATG GAGGGACCCA (2) 5.7 0.0057