Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.206505	Timp2	tissue inhibitor of metalloproteinase 2	11	11 72.0 cM	21858
Mm.206505	4921501M06Rik	RIKEN cDNA 4921501M06 gene	11		78135
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTGGGGGAG (3) CTGGGGGCAG (2) GCACAGGCCA GGACAGCGAG GGGAGGGAAA TGCGTGCTGG (2) TTCTGGTTTG (3) 16.3 0.0163 Cb medulloblastoma AATAAACATC (3) CCTGGGGGAG (3) TGCGTGCTGG (2) 11.5 0.0115 P8 GC+1d culture AATAAAACAT (2) ATAAATACAT (2) GGACAGCGAG GTACTGGGTC TGCGTGCTGG (2) 9 0.009 P8 GC+SHH+1d culture AATAAAACAT (2) AATAAACATC (3) ACTAGTGCTT (4) GCACAGGCCA TGCGTGCTGG (2) TTCTGGTTTG (3) 11.8 0.0118 3T3 fibroblasts CACGCATATG (2) GCACAGGCCA TGCGTGCTGG (2) TTCTGGTTTG (3) 94.6 0.0946 P1 cortex ATAAATACAT (2) TGCGTGCTGG (2) TTCTGGTTTG (3) 22.6 0.0226 Hypothalamus AATAAAACAT (2) GCACAGGCCA TGCGTGCTGG (2) TTCTGGTTTG (3) 39.9 0.0399 E12.5 retina ACTAGTGCTT (4) CCTGGGGGAG (3) GCTGAGAGAA (2) TGCGTGCTGG (2) 11.4 0.0114 E14.5 retina AATAAACATC (3) TGCGTGCTGG (2) 5.4 0.0054 E16.5 retina AATAAACATC (3) GGACAGCGAG 5.4 0.0054 E18.5 retina ATAAATACAT (2) TGCGTGCTGG (2) 7.3 0.0073 P0.5 retina CCTGGGGGAG (3) GCTGAGAGAA (2) GTACTGGGTC TTCTGGTTTG (3) 11.9 0.0119 P2.5 retina AATAAACATC (3) ATAAATACAT (2) GGGAGGGAAA TGCGTGCTGG (2) 8.9 0.0089 P4.5 retina ACTAGTGCTT (4) CCTGGGGGAG (3) GCTGAGAGAA (2) TGCGTGCTGG (2) TTCTGGTTTG (3) 15.9 0.0159 P6.5 retina AATAAAACAT (2) AATAAACATC (3) ATAAATACAT (2) CCTGGGGGAG (3) TGCGTGCTGG (2) TTCTGGTTTG (3) 11.8 0.0118 P10.5 crx- retina CCTGGGGGAG (3) TGCGTGCTGG (2) TTCTGGTTTG (3) 7.5 0.0075 P10.5 crx+ retina CCTGGGGGAG (3) GGGAGGGAAA TGCGTGCTGG (2) 9.6 0.0096 Adult retinal AATAAAACAT (2) ATAAATACAT (2) CCTGGGGGAG (3) CTGGGGGCAG (2) GTACTGGGTC TGCGTGCTGG (2) 16.9 0.0169 ONL AATAAACATC (3) ATAAATACAT (2) 3.8 0.0038