Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.207263	Tcea1	transcription elongation factor A (SII) 1	1		21399
Gene Ontology	DNA binding | nucleoplasm | nucleus | positive regulation of transcription, DNA-dependent | protein binding | regulation of transcription, DNA-dependent | RNA elongation | transcription | transcription factor activity | translation elongation factor activity
Human Homolog	TCEA1[transcription elongation factor A (SII), 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATACAAAA ACCCTAGAAT GATAATTTCT GTGTCTGTTC (4) TTAAAAGGAA (3) 16.2 0.0162 Cb medulloblastoma AAATACAAAA GATAATTTCT 11.5 0.0115 P8 GC+1d culture ACCCTAGAAT ATGATGTCAA (2) GATAATTTCT GTGTCTGTTC (4) TTAAAAGGAA (3) TTAAAAGGAT (3) 7.8 0.0078 P8 GC+SHH+1d culture ACCCTAGAAT GATAATTTCT GTGTCTGTTC (4) 7.1 0.0071 3T3 fibroblasts GTGTCTGTTC (4) 3.5 0.0035 E15 cortex ACCCTAGAAT ATGATGTCAA (2) GATAATTTCT 14.7 0.0147 P1 cortex GTGTCTGTTC (4) TTAAAAGGAA (3) 13.6 0.0136 Hypothalamus GTGTCTGTTC (4) 1.8 0.0018 E12.5 retina AAATACAAAA GATAATTTCT GTGTCTGTTC (4) TTAAAGGATT 13.2 0.0132 E14.5 retina GATAATTTCT GTGTCTGTTC (4) TTAAAAGGAA (3) 16.3 0.0163 E16.5 retina AAATACAAAA GATAATTTCT GTGTCTGTTC (4) TTAAAAGGAA (3) TTAAAAGGAT (3) 18 0.018 E18.5 retina ATGATGTCAA (2) GATAATTTCT GTGTCTGTTC (4) 18.2 0.0182 P0.5 retina ATGATGTCAA (2) GATAATTTCT 9.9 0.0099 P2.5 retina GATAATTTCT GTGTCTGTTC (4) TTAAAAGGAT (3) 14.1 0.0141 P4.5 retina AAATACAAAA GTGTCTGTTC (4) 6 0.006 P6.5 retina GATAATTTCT GTGTCTGTTC (4) TTAAAGGATT 8.4 0.0084 P10.5 crx- retina GATAATTTCT 3.7 0.0037 P10.5 crx+ retina GATAATTTCT GTGTCTGTTC (4) TTAAAAGGAA (3) 9.6 0.0096 Adult retinal AAATACAAAA GTGTCTGTTC (4) 5.6 0.0056 ONL GATAATTTCT GTGTCTGTTC (4) TTAAAAGGAA (3) TTAAAAGGAT (3) TTAAAGGATT 32.5 0.0325