Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2082	Apod	apolipoprotein D	16	16 21.2 cM	11815
Gene Ontology	extracellular space | lipid binding | transport | transporter activity
Human Homolog	APOD[apolipoprotein D]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAGAAAAA (3) AACCAAGTAA (2) GAAAGTTGGC (2) GTGGCGCACG TGGGATTTTG 26.1 0.0261 Cb medulloblastoma AAAAGAAAAA (3) AACCAAGTAA (2) GAAAGTTGGC (2) GTGGCGCACG 64.7 0.0647 P8 GC+1d culture AAAAGAAAAA (3) GAAAGTTGGC (2) GAAGAGCCAG (3) GCAGGCACTA GTGGCGCACG TGGGATTTTG 20.3 0.0203 P8 GC+SHH+1d culture AAAAGAAAAA (3) GAAAGTTGGC (2) GCAGGCACTA GTGGCGCACG 21.1 0.0211 3T3 fibroblasts GAAAGTTGGC (2) GTGGCGCACG TGGATTTTGT (2) 70.1 0.0701 E15 cortex GAAAGTTGGC (2) GCAGGCACTA GTGGCGCACG 123.6 0.1236 P1 cortex GAAAGTTGGC (2) GTGGCGCACG 22.7 0.0227 Hypothalamus GAAAGTTGGC (2) GAAGAGCCAG (3) GCAGGCACTA GTGGCGCACG TGGATTTTGT (2) 39.8 0.0398 E12.5 retina GTGGCGCACG 11.3 0.0113 E14.5 retina GTCTACAAAG GTGGCGCACG TGGATTTTGT (2) 36.5 0.0365 E16.5 retina AACCAAGTAA (2) GTCTACAAAG GTGGCGCACG 32.6 0.0326 E18.5 retina AAAAGAAAAA (3) GTGGCGCACG 16.4 0.0164 P0.5 retina GAAAGTTGGC (2) GTCTACAAAG GTGGCGCACG TGGGATTTTG 37.3 0.0373 P2.5 retina AAAAGAAAAA (3) GTCTACAAAG GTGGCGCACG 28.1 0.0281 P4.5 retina AAAAGAAAAA (3) GAAAGTTGGC (2) GTCTACAAAG GTGGCGCACG TGGATTTTGT (2) TGGGATTTTG 41.6 0.0416 P6.5 retina AACCAAGTAA (2) GAAAGTTGGC (2) GTGGCGCACG TGGGATTTTG 48.2 0.0482 P10.5 crx- retina AAAAGAAAAA (3) AACCAAGTAA (2) GTCTACAAAG GTGGCGCACG 20.5 0.0205 P10.5 crx+ retina AAAAGAAAAA (3) GAAGAGCCAG (3) GTGGCGCACG 36.5 0.0365 Adult retinal AAAAGAAAAA (3) GTCTACAAAG GTGGCGCACG 29.7 0.0297 ONL AAAAGAAAAA (3) GTCTACAAAG GTGGCGCACG 30.6 0.0306