Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.208924
Scmh1
sex comb on midleg homolog 1
4
4 56.5 cM
29871
Human Homolog
SCMH1[sex comb on midleg homolog 1 (Drosophila)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 27 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAATTGGAAG
ACCAAGGCAA (
2
)
3.2
0.0032
Cb medulloblastoma
ACCAAGGCAA (
2
)
2.3
0.0023
P8 GC+1d culture
ACCAAGGCAA (
2
)
CCTTCTCACT
6.8
0.0068
P8 GC+SHH+1d culture
CCTTCTCACT
3.5
0.0035
E15 cortex
ACCAAGGCAA (
2
)
4.9
0.0049
Hypothalamus
GGGCCACCTC
1.8
0.0018
E14.5 retina
ACCAAGGCAA (
2
)
14.6
0.0146
E16.5 retina
CCTTCTCACT
1.8
0.0018
E18.5 retina
ACCAAGGCAA (
2
)
1.8
0.0018
P0.5 retina
ACCAAGGCAA (
2
)
GGGCTGAAGC
5.9
0.0059
P2.5 retina
ACCAAGGCAA (
2
)
CCTTCTCACT
GGGCTGAAGC
5.4
0.0054
P6.5 retina
ACCAAGGCAA (
2
)
CCTTCTCACT
3.4
0.0034
P10.5 crx- retina
GGGCCACCTC
1.9
0.0019
P10.5 crx+ retina
ACCAAGGCAA (
2
)
GGGCCACCTC
GGGCTGAAGC
5.7
0.0057
Adult retinal
ACCAAGGCAA (
2
)
GGGCTGAAGC
3.8
0.0038
ONL
AAATTGGAAG
ACCAAGGCAA (
2
)
CCTTCTCACT
13.4
0.0134
