| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAACTCTGC GCTTTATTAA (4) TGTGATGTTA (2) TTATTGATAG TTCTACGCAT TTGTCTGTAA (3)
| 12.9 | 0.0129 |
| Cb medulloblastoma | AAAACTCTGC CTGACTTAAG (2) TTGTCTGTAA (3)
| 6.9 | 0.0069 |
| P8 GC+1d culture | AAAACTCTGC CTGACTTAAG (2) GCTTTATTAA (4) GTTTAAAAAT TGTGATGTTA (2) TTATTGATAG TTGTCTGTAA (3)
| 17.2 | 0.0172 |
| P8 GC+SHH+1d culture | CTGACTTAAG (2) GCTTTATTAA (4) TGTGATGTTA (2) TTGTCTGTAA (3)
| 9.3 | 0.0093 |
| 3T3 fibroblasts | TGTGATGTTA (2)
| 3.5 | 0.0035 |
| P1 cortex | TGTGATGTTA (2) TTGTCTGTAA (3)
| 9 | 0.009 |
| Hypothalamus | CAGAGGGCCA TTGTCTGTAA (3) TTTCTAACCA (2)
| 5.4 | 0.0054 |
| E12.5 retina | AAAACTCTGC AACTTGAAAA (3) CTGACTTAAG (2) GCTTTATTAA (4) GTAAAGCAGA TTTCTAACCA (2)
| 20.8 | 0.0208 |
| E14.5 retina | AAAACTCTGC AACTTGAAAA (3) CTGACTTAAG (2) GATGAAATAT GCTTTATTAA (4) GTTTAAAAAT TTATTGATAG TTGTCTGTAA (3)
| 18 | 0.018 |
| E16.5 retina | AAAACTCTGC GATGAAATAT GTAAAGCAGA TTATTGATAG TTCTACGCAT
| 19.9 | 0.0199 |
| E18.5 retina | AAAACTCTGC AACTTGAAAA (3) ATTACTAAAA CAGAGGGCCA GCTTTATTAA (4) GTAAAGCAGA TGTGATGTTA (2) TTATTGATAG TTGTCTGTAA (3)
| 19.9 | 0.0199 |
| P0.5 retina | AAAACTCTGC GTTTAAAAAT TGTGATGTTA (2)
| 9.8 | 0.0098 |
| P2.5 retina | AAAACTCTGC ATTACTAAAA CTGACTTAAG (2) GTTTAAAAAT TCGAAATGCA TTATTGATAG TTGTCTGTAA (3)
| 17.8 | 0.0178 |
| P4.5 retina | AAAACTCTGC GCTTTATTAA (4) GTTTAAAAAT TCGAAATGCA TGTGATGTTA (2) TTCTACGCAT TTGTCTGTAA (3) TTTCTAACCA (2)
| 25.8 | 0.0258 |
| P6.5 retina | AAAACTCTGC CTGACTTAAG (2) TGTGATGTTA (2)
| 15 | 0.015 |
| P10.5 crx- retina | AAAACTCTGC CTGACTTAAG (2) GATGAAATAT GCTTTATTAA (4) TGTGATGTTA (2) TTATTGATAG TTGTCTGTAA (3)
| 20.6 | 0.0206 |
| P10.5 crx+ retina | AAAACTCTGC CTGACTTAAG (2) GTTTAAAAAT TCGAAATGCA TGTGATGTTA (2) TTATTGATAG TTGTCTGTAA (3)
| 20.9 | 0.0209 |
| Adult retinal | AACTTGAAAA (3) GCTTTATTAA (4) TGTGATGTTA (2) TTGTCTGTAA (3)
| 11.2 | 0.0112 |
| ONL | ATTACTAAAA GTTTAAAAAT TGTGATGTTA (2)
| 5.7 | 0.0057 |