Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.20937
Hpcal1
hippocalcin-like 1
12
53602
Gene Ontology
calcium ion binding
Human Homolog
HPCAL1[hippocalcin-like 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 30 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCCAGGGCTG
(
2
)
3.3
0.0033
Cb medulloblastoma
CAAAGGAAGG
CCCAGGGCTG
(
2
)
6.9
0.0069
P8 GC+1d culture
CCCAGGCTGT
2.3
0.0023
P8 GC+SHH+1d culture
CCCAGGGCTG
(
2
)
TTCAGCTTTG
(
2
)
4.7
0.0047
3T3 fibroblasts
CCCAGGGCTG
(
2
)
3.5
0.0035
E15 cortex
CCCAGGGCTG
(
2
)
9.9
0.0099
P1 cortex
GTCCCCTGTG
4.5
0.0045
E12.5 retina
CCCAGGGCTG
(
2
)
1.9
0.0019
E14.5 retina
CCCAGGGCTG
(
2
)
GTCCCCTGTG
3.6
0.0036
E16.5 retina
CCCAGGGCTG
(
2
)
GTCCCCTGTG
3.6
0.0036
E18.5 retina
CCCAGGGCTG
(
2
)
1.8
0.0018
P0.5 retina
CCCAGGGCTG
(
2
)
GTCCCCTGTG
7.9
0.0079
P2.5 retina
CCCAGGGCTG
(
2
)
3.5
0.0035
P4.5 retina
CAAAGGAAGG
CCCAGGCTGT
TTCAGCTTTG
(
2
)
6
0.006
P6.5 retina
CAAAGGAAGG
1.7
0.0017
P10.5 crx- retina
CCCAGGCTGT
11.1
0.0111
P10.5 crx+ retina
CCCAGGCTGT
CCCAGGGCTG
(
2
)
17.3
0.0173
Adult retinal
CCCAGGCTGT
CCCAGGGCTG
(
2
)
18.5
0.0185
ONL
CCCAGGCTGT
CCCAGGGCTG
(
2
)
TTCAGCTTTG
(
2
)
15.3
0.0153
