Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.209491	2610318I01Rik	RIKEN cDNA 2610318I01 gene	3		214459
Human Homolog	C1orf39[chromosome 1 open reading frame 39]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATCAAACTA (3) GTCAAAAAAA GTCAGTTAAA (2) TGAGCTGTCT (2) TGCACATCTG TGGATGCTGG (3) 26.1 0.0261 Cb medulloblastoma GTCAAAAAAA GTCAGTTAAA (2) TGGATGCTGG (3) 13.8 0.0138 P8 GC+1d culture CAGATTTTTT (2) GATCAAACTA (3) GTCAAAAAAA GTCAGTTAAA (2) TGAGCTGTCT (2) TGCACATCTG TGGATGCTGG (3) 37.6 0.0376 P8 GC+SHH+1d culture AAGGAACTTG CAGATTTTTT (2) GGTCAAAAAA GTCAAAAAAA GTCAGTTAAA (2) TGAGCTGTCT (2) TGGATGCTGG (3) 28.1 0.0281 3T3 fibroblasts TGAGCTGTCT (2) TGGATGCTGG (3) 7 0.007 E15 cortex GGTCAAAAAA GTCAAAAAAA GTCAGTTAAA (2) TGGATGCTGG (3) 49.3 0.0493 P1 cortex GTCAAAAAAA GTCAGTTAAA (2) TGAGCTGTCT (2) 31.7 0.0317 Hypothalamus GTCAAAAAAA TGAGCTGTCT (2) TGGATGCTGG (3) 12.6 0.0126 E12.5 retina GTCAAAAAAA GTCAGTTAAA (2) TGAGCTGTCT (2) TGGATGCTGG (3) 11.3 0.0113 E14.5 retina GGTCAAAAAA GTCAAAAAAA GTCAGTTAAA (2) TGGATGCTGG (3) 32.7 0.0327 E16.5 retina AAGGAACTTG CAGATTTTTT (2) GTCAAAAAAA GTCAGTTAAA (2) TGCACATCTG TGGATGCTGG (3) 50.7 0.0507 E18.5 retina AAGGAACTTG GGTCAAAAAA GTCAAAAAAA GTCAGTTAAA (2) TGAGCTGTCT (2) TGGATGCTGG (3) 47.2 0.0472 P0.5 retina GTCAAAAAAA GTCAGTTAAA (2) TGGATGCTGG (3) 17.8 0.0178 P2.5 retina AAGGAACTTG GATCAAACTA (3) GTCAAAAAAA GTCAGTTAAA (2) TGGATGCTGG (3) 37 0.037 P4.5 retina GGTCAAAAAA GTCAAAAAAA GTCAGTTAAA (2) TGGATGCTGG (3) 19.8 0.0198 P6.5 retina AAGGAACTTG GATCAAACTA (3) GTCAAAAAAA GTCAGTTAAA (2) TGGATGCTGG (3) 21.8 0.0218 P10.5 crx- retina GTCAAAAAAA TGGATGCTGG (3) 9.3 0.0093 P10.5 crx+ retina GTCAAAAAAA GTCAGTTAAA (2) TGAGCTGTCT (2) TGGATGCTGG (3) 17.3 0.0173 Adult retinal GTCAAAAAAA TGAGCTGTCT (2) TGGATGCTGG (3) 14.9 0.0149 ONL GATCAAACTA (3) GTCAAAAAAA TGAGCTGTCT (2) 5.7 0.0057