Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.209903	Atf2	activating transcription factor 2	2	2 C3	11909
Gene Ontology	DNA binding | nucleic acid binding | nucleus | protein binding | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex | zinc ion binding
Human Homolog	ATF2[activating transcription factor 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 98 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTAAACCAT GCTTACTTAA (4) TGCCTGCTCC TGTCACCCTC 26.1 0.0261 Cb medulloblastoma ACTAAACCAT CAAACTGTAC GTCCTGGCCA TCTTAATAAA (2) 25.4 0.0254 P8 GC+1d culture ACTAAACCAT GCTCCTCCCT GCTTACTTAA (4) TCTTAATAAA (2) TGACGGGGAA TGCCTGCTCC TGTCACCCTC 38.8 0.0388 P8 GC+SHH+1d culture ACTAAACCAT CAGAAGAAGT GCTCCTCCCT GCTTACTTAA (4) GCTTATTAAA TCTTAATAAA (2) TGCCTGCTCC 36.2 0.0362 3T3 fibroblasts GTCCTGGCCA TGCCTGCTCC 31.5 0.0315 E15 cortex ACTAAACCAT GATCCCAGGC (2) GCTCCTCCCT TGCCTGCTCC 29.5 0.0295 P1 cortex ACTAAACCAT GCTCCTCCCT TGCCTGCTCC 27.2 0.0272 Hypothalamus ACTAAACCAT GATCCCAGGC (2) TCTTAATAAA (2) TGACGGGGAA TGCCTGCTCC 38 0.038 E12.5 retina ACTAAACCAT CAAACTGTAC CAGAAGAAGT GTCCTGGCCA TGCCTGCTCC 28.2 0.0282 E14.5 retina ACTAAACCAT CAAACTGTAC GCTTATTAAA GTCCTGGCCA TGCCTGCTCC TGTCACCCTC 29 0.029 E16.5 retina ACTAAACCAT GATCCCAGGC (2) GCTTACTTAA (4) GTCCTGGCCA TCTTAATAAA (2) TGCCTGCTCC 38 0.038 E18.5 retina ACTAAACCAT GATCCCAGGC (2) GCTCCTCCCT GCTTACTTAA (4) GCTTATTAAA TCTTAATAAA (2) TGCCTGCTCC 32.7 0.0327 P0.5 retina ACTAAACCAT GATCCCAGGC (2) GCTCCTCCCT GCTTACTTAA (4) GTCCTGGCCA TCTTAATAAA (2) TGCCTGCTCC 23.7 0.0237 P2.5 retina ACTAAACCAT GCTCCTCCCT TGCCTGCTCC 21.2 0.0212 P4.5 retina ACTAAACCAT GATCCCAGGC (2) GTCCTGGCCA TGCCTGCTCC 51.5 0.0515 P6.5 retina ACTAAACCAT GATCCCAGGC (2) GCTCCTCCCT GCTTACTTAA (4) TGCCTGCTCC 41.8 0.0418 P10.5 crx- retina ACTAAACCAT GATCCCAGGC (2) GCTTACTTAA (4) GTCCTGGCCA TCTTAATAAA (2) TGACGGGGAA TGCCTGCTCC 24.3 0.0243 P10.5 crx+ retina ACTAAACCAT CAGAAGAAGT GATCCCAGGC (2) GCTCCTCCCT GCTTATTAAA TGCCTGCTCC 40.3 0.0403 Adult retinal ACTAAACCAT GATCCCAGGC (2) TGCCTGCTCC 14.8 0.0148 ONL ACTAAACCAT GATCCCAGGC (2) TGCCTGCTCC 21 0.021