| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AATCCTGGGG ATCCTGTGCT ATCTTGTGTT (4) CTGAAGATCA
| 16.2 | 0.0162 |
| P8 GC+1d culture | ATCCTGTGCT ATCTTGTGTT (4)
| 13.7 | 0.0137 |
| P8 GC+SHH+1d culture | ATCCTGTGCT CTGAAGATCA
| 18.8 | 0.0188 |
| 3T3 fibroblasts | ATCCTGTGCT CCCGTGCGCT
| 63.1 | 0.0631 |
| E15 cortex | CCCGTGCGCT
| 4.9 | 0.0049 |
| P1 cortex | ATCCTGTGCT
| 4.5 | 0.0045 |
| Hypothalamus | ATCTTGTGTT (4) GCCGGGGAAT
| 3.6 | 0.0036 |
| E12.5 retina | CCCGTGCGCT CTGAAGATCA TTTTGAAATT (2)
| 5.7 | 0.0057 |
| E14.5 retina | ATCTTGTGTT (4) CTGAAGATCA TTTTGAAATT (2)
| 5.4 | 0.0054 |
| E16.5 retina | ATCTTGTGTT (4) TTTTGAAATT (2)
| 7.2 | 0.0072 |
| E18.5 retina | ATCTTGTGTT (4) GCCGGGGAAT TTTTGAAATT (2)
| 7.2 | 0.0072 |
| P0.5 retina | CTGAAGATCA GCCGGGGAAT
| 4 | 0.004 |
| P2.5 retina | CTGAAGATCA GCCGGGGAAT
| 5.3 | 0.0053 |
| P4.5 retina | ACAAGCAAAA (2) ATCCTGTGCT ATCTTGTGTT (4) GCCGGGGAAT TTTTGAAATT (2)
| 14 | 0.014 |
| P6.5 retina | ACAAGCAAAA (2) ATCCTGTGCT ATCTTGTGTT (4) TTTTGAAATT (2)
| 10 | 0.01 |
| P10.5 crx- retina | AATCCTGGGG ACAAGCAAAA (2) ATCCTGTGCT ATCTTGTGTT (4) CTGAAGATCA
| 11.3 | 0.0113 |
| P10.5 crx+ retina | ATCCTGTGCT ATCTTGTGTT (4) CTGAAGATCA
| 9.5 | 0.0095 |
| Adult retinal | ATCCTGTGCT GCCGGGGAAT
| 3.8 | 0.0038 |
| ONL | AATCCTGGGG
| 3.8 | 0.0038 |