| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ACCGCTCTGA ACCTGCTGGT (3) CAAGACTGTC CCAAAGAAGC (2)
| 11.4 | 0.0114 |
| Cb medulloblastoma | ACCTGCTGGT (3) CCAAAAGGAA
| 9.2 | 0.0092 |
| P8 GC+1d culture | ACCTGCTGGT (3) CAAGACTGTC CAGGACTGTC (2) CCAAAAGGAA CCAAAGAAGC (2)
| 14.7 | 0.0147 |
| P8 GC+SHH+1d culture | ACCTGCTGGT (3) CAAGACTGTC CCAAAAGGAA
| 5.9 | 0.0059 |
| 3T3 fibroblasts | ACCTGCTGGT (3) CAGGACTGTC (2)
| 10.5 | 0.0105 |
| E15 cortex | ACCTGCTGGT (3)
| 4.9 | 0.0049 |
| P1 cortex | ACCTGCTGGT (3) CCAAAAGGAA
| 13.6 | 0.0136 |
| Hypothalamus | CAAGACTGTC CAGGACTGTC (2) CCAAAAGGAA GTGGGGTTGG
| 19.9 | 0.0199 |
| E12.5 retina | ACCTGCTGGT (3) CAGGACTGTC (2) CCAAAAGGAA
| 13.2 | 0.0132 |
| E14.5 retina | ACCTGCTGGT (3) CAGGACTGTC (2)
| 9.1 | 0.0091 |
| E16.5 retina | ACCTGCTGGT (3) CAAGACTGTC CAGGACTGTC (2)
| 9 | 0.009 |
| E18.5 retina | ACCGCTCTGA CAAGACTGTC
| 5.4 | 0.0054 |
| P0.5 retina | ACCTGCTGGT (3) CAAGACTGTC CCAAAAGGAA CCAAAGAAGC (2)
| 13.9 | 0.0139 |
| P2.5 retina | ACCTGCTGGT (3) CAAGACTGTC CCAAAAGGAA CCAAAGAAGC (2)
| 12.4 | 0.0124 |
| P4.5 retina | ACCTGCTGGT (3) CCAAAGAAGC (2)
| 6 | 0.006 |
| P6.5 retina | ACCTGCTGGT (3) CAAGACTGTC CCAAAAGGAA CCAAAGAAGC (2)
| 11.6 | 0.0116 |
| P10.5 crx- retina | ACCTGCTGGT (3) CAGGACTGTC (2) CCAAAAGGAA GTGGGGTTGG
| 31.7 | 0.0317 |
| P10.5 crx+ retina | ACCTGCTGGT (3) CAAGACTGTC CCAAAAGGAA CCAAAGAAGC (2)
| 30.8 | 0.0308 |
| Adult retinal | ACCTGCTGGT (3) CAGGACTGTC (2) CCAAAAGGAA CCAAAGAAGC (2)
| 22.4 | 0.0224 |
| ONL | ACCTGCTGGT (3) CAGGACTGTC (2)
| 3.8 | 0.0038 |