Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21104	5630401J11Rik	RIKEN cDNA 5630401J11 gene	17		106489
Gene Ontology	integral to membrane
Human Homolog	C6orf83[chromosome 6 open reading frame 83]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 88 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACCGCTGCA GGCAGCCCCC (2) GGCCTGAGGC (3) TCTACACATA 58.8 0.0588 Cb medulloblastoma CTTTCTAATG (3) GACTGCTGCA (2) GGCAGCCCCC (2) GGCCTGAGGC (3) TCTACACATA TGACCAACTG 57.7 0.0577 P8 GC+1d culture CTTTCTAATG (3) CTTTTTAATG GACCGCTGCA GGCAGCCCCC (2) GGCCTGAGGC (3) TCTACACATA 58.1 0.0581 P8 GC+SHH+1d culture CTTTCTAATG (3) GGCAGCCCCC (2) GGCCTGAGGC (3) TCTACACATA TGACCAACTG 63.3 0.0633 3T3 fibroblasts GACTGCTGCA (2) GGCAGCCCCC (2) GGCCTGAGGC (3) 133.1 0.1331 E15 cortex GACTGCTGCA (2) GGCAGCCCCC (2) GGCCTGAGGC (3) 74.1 0.0741 P1 cortex GACCGCTGCA GGCAGCCCCC (2) TCTACACATA 36.3 0.0363 Hypothalamus GACCGCTGCA GGCCTGAGGC (3) TCTACACATA TGACCAACTG 48.8 0.0488 E12.5 retina GGCAGCCCCC (2) GGCCTGAGGC (3) TCTACACATA 50.8 0.0508 E14.5 retina GGCAGCCCCC (2) GGCCTGAGGC (3) TCTACACATA 31 0.031 E16.5 retina CTTTCTAATG (3) GGCAGCCCCC (2) GGCCTGAGGC (3) TCTACACATA 39.9 0.0399 E18.5 retina GGCAGCCCCC (2) GGCCTGAGGC (3) TCTACACATA 43.7 0.0437 P0.5 retina GACCGCTGCA GGCAGCCCCC (2) GGCCTGAGGC (3) TCTACACATA TGACCAACTG 47.2 0.0472 P2.5 retina CTTTCTAATG (3) GACCGCTGCA GACTGCTGCA (2) GGCAGCCCCC (2) GGCCTGAGGC (3) TCTACACATA TGACCAACTG 72.3 0.0723 P4.5 retina GACCGCTGCA GGCAGCCCCC (2) GGCCTGAGGC (3) TCTACACATA TGACCAACTG 61.4 0.0614 P6.5 retina GACCGCTGCA GGCAGCCCCC (2) GGCCTGAGGC (3) TCTACACATA 68.5 0.0685 P10.5 crx- retina CTTTCTAATG (3) GACCGCTGCA GGCAGCCCCC (2) GGCCTGAGGC (3) TCTACACATA 59.6 0.0596 P10.5 crx+ retina CTTTCTAATG (3) GGCAGCCCCC (2) GGCCTGAGGC (3) TCTACACATA 36.5 0.0365 Adult retinal CTTTCTAATG (3) CTTTTTAATG GGCAGCCCCC (2) GGCCTGAGGC (3) TCTACACATA TGACCAACTG 31.6 0.0316 ONL CTTTCTAATG (3) GACCGCTGCA GGCAGCCCCC (2) GGCCTGAGGC (3) TCTACACATA 24.9 0.0249