Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21138	Nufip1	nuclear fragile X mental retardation protein interacting protein	14		27275
Gene Ontology	nucleus | RNA binding
Human Homolog	NUFIP1[nuclear fragile X mental retardation protein interacting protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 86 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAGAAATGT ACCAAGGCAA (2) CTCCCACCTT (3) CTGCCGCCGC (3) TTGGATTTTA (2) 16.3 0.0163 Cb medulloblastoma ACCAAGGCAA (2) CTCCCACCTT (3) CTGCCGCCGC (3) 27.8 0.0278 P8 GC+1d culture AAAGAAATGT ACCAAGGCAA (2) AGGCTACCAG CTCCCACCTT (3) CTGCCGCCGC (3) TTGGATTTTA (2) 34.2 0.0342 P8 GC+SHH+1d culture AAAGAAATGT AGGCTACCAG CTCCCACCTT (3) CTGCCGCCGC (3) TTGGATTTTA (2) 24.6 0.0246 3T3 fibroblasts AGGCTACCAG CTCCCACCTT (3) CTGCCGCCGC (3) 45.5 0.0455 E15 cortex ACCAAGGCAA (2) CTCCCACCTT (3) CTGCCGCCGC (3) 54.4 0.0544 P1 cortex CTGCCGCCGC (3) TTGGATTTTA (2) 31.8 0.0318 Hypothalamus AAAGAAATGT CTCCCACCTT (3) CTGCCGCCGC (3) 19.9 0.0199 E12.5 retina AAAGAAATGT CTCCCACCTT (3) CTGCCGCCGC (3) TTGGATTTTA (2) 22.6 0.0226 E14.5 retina ACCAAGGCAA (2) CTCCCACCTT (3) CTGCCGCCGC (3) TTGGATTTTA (2) 40.1 0.0401 E16.5 retina AAAGAAATGT CTCCCACCTT (3) TTGGATTTTA (2) 14.5 0.0145 E18.5 retina AAAGAAATGT ACCAAGGCAA (2) CTCCCACCTT (3) CTGCCGCCGC (3) TTGGATTTTA (2) 30.9 0.0309 P0.5 retina ACCAAGGCAA (2) AGGCTACCAG CTCCCACCTT (3) CTGCCGCCGC (3) TTGGATTTTA (2) 37.3 0.0373 P2.5 retina AAAGAAATGT ACCAAGGCAA (2) CTCCCACCTT (3) CTGCCGCCGC (3) TTGGATTTTA (2) 33.5 0.0335 P4.5 retina AAAGAAATGT CTCCCACCTT (3) CTGCCGCCGC (3) TTGGATTTTA (2) 51.5 0.0515 P6.5 retina AAAGAAATGT ACCAAGGCAA (2) AGGCTACCAG CTCCCACCTT (3) CTGCCGCCGC (3) TTGGATTTTA (2) 35.1 0.0351 P10.5 crx- retina AAAGAAATGT AGGCTACCAG CTCCCACCTT (3) CTGCCGCCGC (3) 31.6 0.0316 P10.5 crx+ retina AAAGAAATGT ACCAAGGCAA (2) AGGCTACCAG CTCCCACCTT (3) CTGCCGCCGC (3) TTGGATTTTA (2) 49.9 0.0499 Adult retinal AAAGAAATGT ACCAAGGCAA (2) CTCCCACCTT (3) CTGCCGCCGC (3) 57.5 0.0575 ONL AAAGAAATGT ACCAAGGCAA (2) AGGCTACCAG CTCCCACCTT (3) CTGCCGCCGC (3) TTGGATTTTA (2) 45.9 0.0459