Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.211477
5430404G13Rik
RIKEN cDNA 5430404G13 gene
16
74502
Mm.211477
Phldb2
pleckstrin homology-like domain, family B, member 2
16
208177
Mm.211477
D130060J10Rik
RIKEN cDNA D130060J10 gene
16
319595
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 37 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAAAAAAATA (
3
)
1.6
0.0016
Cb medulloblastoma
AACTGAGCAG
(
3
)
GAAAAAGCAA
GTCAAAGTGT (
2
)
TTTCCAAAAA
11.5
0.0115
P8 GC+1d culture
AACTGAGCAG
(
3
)
ACAGTGTCTA
(
4
)
CCTTTCAGTC
GCCTCCTCTT
TTTCCAAAAA
7.9
0.0079
3T3 fibroblasts
CCTTTCAGTC
3.5
0.0035
P1 cortex
ACAGTGTCTA
(
4
)
4.5
0.0045
Hypothalamus
GAAAAAGCAA
GCCTCCTCTT
GTCAAAGTGT (
2
)
9
0.009
E12.5 retina
CCTTTCAGTC
TTTCCAAAAA
3.8
0.0038
E14.5 retina
CCTTTCAGTC
GCCTCCTCTT
3.6
0.0036
E16.5 retina
GAAAAAAATA (
3
)
GAAAAAGCAA
GTCAAAGTGT (
2
)
9
0.009
E18.5 retina
GAAAAAAATA (
3
)
GCCTCCTCTT
TTTCCAAAAA
7.2
0.0072
P0.5 retina
ACAGTGTCTA
(
4
)
GAAAAAGCAA
GCCTCCTCTT
7.9
0.0079
P4.5 retina
GAAAAAGCAA
TTTCCAAAAA
4
0.004
P10.5 crx- retina
GCCTCCTCTT
1.9
0.0019
P10.5 crx+ retina
CCTTTCAGTC
GCCTCCTCTT
5.7
0.0057
Adult retinal
ACAGTGTCTA
(
4
)
GCCTCCTCTT
TTTCCAAAAA
7.5
0.0075
ONL
GAAAAAGCAA
3.8
0.0038
